| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199261
Identifier: 87199261
GI number: 87199261
Start: 1290408
End: 1290764
Strand: Direct
Name: 87199261
Synonym: Saro_1239
Alternate gene names: NA
Gene position: 1290408-1290764 (Clockwise)
Preceding gene: 87199260
Following gene: 87199262
Centisome position: 36.23
GC content: 68.07
Gene sequence:
>357_bases ATGACCAATGCCGATCATGTTACCGTCCACGGCCTGCGCATCACCCGTGACCTGCACGAAGCGGAAGCTGCACTCGATGA AGTGCTGATCCGGCAGGCGAACCTGCTCGCGACGATGGTCCGCGCCCGGCGCGAGGCTTCCGTCGGACCATTCACGGGCC AGGAAGCCCTCCTGCGGCTCGCCGCCAGCCAGAAAGCCGTGCTCCATGCCAGCGGCGAACTGGCCCGGGTCCATGGCAAG TTGCTCGACGTCGGTCGCGAAGTCGGCAGCGGCATGGTCGACGATTGCCCCCCGAAGGGCGCCACCGGGTCTGCCGAACT GCCTGCGGGCGTTCCTGCCGTGCTCCGGGTCGCCTGA
Upstream 100 bases:
>100_bases AGGCCGGTCCTTCATTTCCCGCTGACAACCGGGGCAGGGCGCGTTGCGCGCGCGGCCCCTTTGCAAGGGGGCTGCCGTGG CAACGCGGCAGGGCTTGAAG
Downstream 100 bases:
>100_bases CGGGAATGCCCGCCCTGCCTGCAACGGGTGACACGTCATGTTCCTGATCTGGCTGCTCAGGCTGTCGATCCTGGCCGTTC TGGCCTTCGCCGCACGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTNADHVTVHGLRITRDLHEAEAALDEVLIRQANLLATMVRARREASVGPFTGQEALLRLAASQKAVLHASGELARVHGK LLDVGREVGSGMVDDCPPKGATGSAELPAGVPAVLRVA
Sequences:
>Translated_118_residues MTNADHVTVHGLRITRDLHEAEAALDEVLIRQANLLATMVRARREASVGPFTGQEALLRLAASQKAVLHASGELARVHGK LLDVGREVGSGMVDDCPPKGATGSAELPAGVPAVLRVA >Mature_117_residues TNADHVTVHGLRITRDLHEAEAALDEVLIRQANLLATMVRARREASVGPFTGQEALLRLAASQKAVLHASGELARVHGKL LDVGREVGSGMVDDCPPKGATGSAELPAGVPAVLRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12348; Mature: 12217
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADHVTVHGLRITRDLHEAEAALDEVLIRQANLLATMVRARREASVGPFTGQEALLRL CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AASQKAVLHASGELARVHGKLLDVGREVGSGMVDDCPPKGATGSAELPAGVPAVLRVA HHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure TNADHVTVHGLRITRDLHEAEAALDEVLIRQANLLATMVRARREASVGPFTGQEALLRL CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AASQKAVLHASGELARVHGKLLDVGREVGSGMVDDCPPKGATGSAELPAGVPAVLRVA HHHCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA