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The map label for this gene is 87199230

Identifier: 87199230

GI number: 87199230

Start: 1255008

End: 1256687

Strand: Direct

Name: 87199230

Synonym: Saro_1208

Alternate gene names: NA

Gene position: 1255008-1256687 (Clockwise)

Preceding gene: 87199229

Following gene: 87199231

Centisome position: 35.24

GC content: 65.77

Gene sequence:

>1680_bases
ATGCAATTCGATGCGATCGTGGTAGGCTCGGGTATCACCGGCGGCTGGGCAGCCAAGGAACTGACGCAGGCGGGCCTAAA
GGTCCTGATGATCGAGCGCGGGCGCGAGATCGTCCACGGCGATTACCCGACCGAGATGAAGACGCCCTGGGAGATGCCGT
TTCGCGGCGTGGGCGATGCCGCGCTTTATGCGCGCGAATACCAGGTGCAGGCGCAGAACCGCCATTTCAACGAGTTCACG
CAGGGGCACTTCGTCAACGACAAGGAGAACCCCTACGCCACTGGTCCGGACAGCGAGTTCAACTGGCTGCGGTCCTATCA
GCTTGGCGGACGCTCGCTGACCTGGGGGAGGCAGGCCTATCGCTGGTCGGACTACGATTTCAGCGCCAACAAGCGCGACG
GCAACGGCACTGACTGGCCGATCCGCTACGCCGACCTGGCTCCATGGTACGACAAGGTCGAGGAGTTCATCGGCGTTTCC
GGCGCGGCGGAGGGCCTGCCGCAGCTTCCCGACGGCCGGTTCCAGCCGCCGATGGCGCTGAACGCCGTGGAGCGTCACGT
CCGGCAGGTCGTGGCGGACAGGTATGGTCGCTGCATGACGGTCGGTCGTGTCGCCAACATGACCCAGGCCAAGCCGGACG
AGGGCCGCTCCGCCTGCCAGAACCGTTCGATCTGTGCGCGCGGTTGCTCGTACGGGGCATATTTCTCGACGCAATCGAGC
ACGCTGCCGGCGGCCAAGGCCACGGGCAACCTGACCGTGGTCACCGATGCCATCGTCGAGCATGTCGACTACGATCCGGC
GACGAAGCGCGTGACCGGCGTGCGCTATGTGAACACCAAGGACGGTTCGCGCGGTAGCGCCACCGCGCGCATGGTGTTCC
TCAACGCCAGTGCATTCAATTCGGTGCACGTGCTGCTGAATTCGCGTTCCGAGGCGATGCCGAACGGGCTGGGCAATTCG
AGCGGCGTTCTGGGCACGCAGATCATGGACCACGCCAACACGCTGTCGACGATTGCGCTGTTCCCGCAGTTCAACGGCCG
CACCAGTTTCGGCAACCGGCCGACGGGCGTGGTCATCGCGCGCTATCGCAACATGGACGAGATGGACGGTGCGGGGCACA
CGCGTGGCTATTCGTACCAGGGCGGCGCATTGCAGAGCAACTGGGGCGCGGGCAAGCGCGAGGCGGGCATCGGCGCCGAC
TTCAAGGACAAGCTGCGTACGCCGGGCATGTGGCGCATGGTGCTGGTCGCCTTCGCCGACTGCGTCCCGCGCGACAGCAA
CCGCCTGACGCTGGACCCGGTGAAAACCGACCGCTTCGGCATTCCCCAACTCCGCATCGACTTCGCCTATGGCAAGGAAG
AGCAGGCAGCACTTGCCCAGGCCAAGGCCGATGCCGCCGAAATGATGACGGCGGCGGGCGGCATGGTCGTCATGGGTTCG
GACCAGCCCGGCACCGGTGGCATGGCGATCCACGAGATGGGCGGCGCGCGCATGGGCCACGACCCGAAGACCTCGGTGCT
CAACAAGTGGAGCCAGAGCCACGACGTCGCCAACCTGTTCGTCACCGACGGCGCGCAGATGGCGTCCTCGGCCTGCCAGA
ACCCTTCGCTCACCTACATGGCGCTGACCGCACGTGCCTGCGATGCGGCGGTCAGGATGCTGCGCGAAGGTGCGATCTGA

Upstream 100 bases:

>100_bases
TGGCCGCTTTGATCCGGACCTGCCGCTGACGCCCGGTTTCCGGGCGATTTCAAGCGACTGGACCGCAGTGGACTTCGGAT
AAGAGCGGAAAGCGACAGAC

Downstream 100 bases:

>100_bases
GCCGATGGCAAATGACATCGCCGGCATGACCGAGAGGCAGAAGAGCCTCGCCTTCTTCACGCTCATCACCGCGCTGGTGC
TGGAGATCGTGGACGTCACG

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MQFDAIVVGSGITGGWAAKELTQAGLKVLMIERGREIVHGDYPTEMKTPWEMPFRGVGDAALYAREYQVQAQNRHFNEFT
QGHFVNDKENPYATGPDSEFNWLRSYQLGGRSLTWGRQAYRWSDYDFSANKRDGNGTDWPIRYADLAPWYDKVEEFIGVS
GAAEGLPQLPDGRFQPPMALNAVERHVRQVVADRYGRCMTVGRVANMTQAKPDEGRSACQNRSICARGCSYGAYFSTQSS
TLPAAKATGNLTVVTDAIVEHVDYDPATKRVTGVRYVNTKDGSRGSATARMVFLNASAFNSVHVLLNSRSEAMPNGLGNS
SGVLGTQIMDHANTLSTIALFPQFNGRTSFGNRPTGVVIARYRNMDEMDGAGHTRGYSYQGGALQSNWGAGKREAGIGAD
FKDKLRTPGMWRMVLVAFADCVPRDSNRLTLDPVKTDRFGIPQLRIDFAYGKEEQAALAQAKADAAEMMTAAGGMVVMGS
DQPGTGGMAIHEMGGARMGHDPKTSVLNKWSQSHDVANLFVTDGAQMASSACQNPSLTYMALTARACDAAVRMLREGAI

Sequences:

>Translated_559_residues
MQFDAIVVGSGITGGWAAKELTQAGLKVLMIERGREIVHGDYPTEMKTPWEMPFRGVGDAALYAREYQVQAQNRHFNEFT
QGHFVNDKENPYATGPDSEFNWLRSYQLGGRSLTWGRQAYRWSDYDFSANKRDGNGTDWPIRYADLAPWYDKVEEFIGVS
GAAEGLPQLPDGRFQPPMALNAVERHVRQVVADRYGRCMTVGRVANMTQAKPDEGRSACQNRSICARGCSYGAYFSTQSS
TLPAAKATGNLTVVTDAIVEHVDYDPATKRVTGVRYVNTKDGSRGSATARMVFLNASAFNSVHVLLNSRSEAMPNGLGNS
SGVLGTQIMDHANTLSTIALFPQFNGRTSFGNRPTGVVIARYRNMDEMDGAGHTRGYSYQGGALQSNWGAGKREAGIGAD
FKDKLRTPGMWRMVLVAFADCVPRDSNRLTLDPVKTDRFGIPQLRIDFAYGKEEQAALAQAKADAAEMMTAAGGMVVMGS
DQPGTGGMAIHEMGGARMGHDPKTSVLNKWSQSHDVANLFVTDGAQMASSACQNPSLTYMALTARACDAAVRMLREGAI
>Mature_559_residues
MQFDAIVVGSGITGGWAAKELTQAGLKVLMIERGREIVHGDYPTEMKTPWEMPFRGVGDAALYAREYQVQAQNRHFNEFT
QGHFVNDKENPYATGPDSEFNWLRSYQLGGRSLTWGRQAYRWSDYDFSANKRDGNGTDWPIRYADLAPWYDKVEEFIGVS
GAAEGLPQLPDGRFQPPMALNAVERHVRQVVADRYGRCMTVGRVANMTQAKPDEGRSACQNRSICARGCSYGAYFSTQSS
TLPAAKATGNLTVVTDAIVEHVDYDPATKRVTGVRYVNTKDGSRGSATARMVFLNASAFNSVHVLLNSRSEAMPNGLGNS
SGVLGTQIMDHANTLSTIALFPQFNGRTSFGNRPTGVVIARYRNMDEMDGAGHTRGYSYQGGALQSNWGAGKREAGIGAD
FKDKLRTPGMWRMVLVAFADCVPRDSNRLTLDPVKTDRFGIPQLRIDFAYGKEEQAALAQAKADAAEMMTAAGGMVVMGS
DQPGTGGMAIHEMGGARMGHDPKTSVLNKWSQSHDVANLFVTDGAQMASSACQNPSLTYMALTARACDAAVRMLREGAI

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 60894; Mature: 60894

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFDAIVVGSGITGGWAAKELTQAGLKVLMIERGREIVHGDYPTEMKTPWEMPFRGVGDA
CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCH
ALYAREYQVQAQNRHFNEFTQGHFVNDKENPYATGPDSEFNWLRSYQLGGRSLTWGRQAY
HHHHHHHEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHE
RWSDYDFSANKRDGNGTDWPIRYADLAPWYDKVEEFIGVSGAAEGLPQLPDGRFQPPMAL
ECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHH
NAVERHVRQVVADRYGRCMTVGRVANMTQAKPDEGRSACQNRSICARGCSYGAYFSTQSS
HHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCC
TLPAAKATGNLTVVTDAIVEHVDYDPATKRVTGVRYVNTKDGSRGSATARMVFLNASAFN
CCCCHHCCCCEEEEEHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCEEEEEEEECCCCC
SVHVLLNSRSEAMPNGLGNSSGVLGTQIMDHANTLSTIALFPQFNGRTSFGNRPTGVVIA
EEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEE
RYRNMDEMDGAGHTRGYSYQGGALQSNWGAGKREAGIGADFKDKLRTPGMWRMVLVAFAD
EECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
CVPRDSNRLTLDPVKTDRFGIPQLRIDFAYGKEEQAALAQAKADAAEMMTAAGGMVVMGS
HCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECC
DQPGTGGMAIHEMGGARMGHDPKTSVLNKWSQSHDVANLFVTDGAQMASSACQNPSLTYM
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCEEEE
ALTARACDAAVRMLREGAI
EEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFDAIVVGSGITGGWAAKELTQAGLKVLMIERGREIVHGDYPTEMKTPWEMPFRGVGDA
CCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCH
ALYAREYQVQAQNRHFNEFTQGHFVNDKENPYATGPDSEFNWLRSYQLGGRSLTWGRQAY
HHHHHHHEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCHHE
RWSDYDFSANKRDGNGTDWPIRYADLAPWYDKVEEFIGVSGAAEGLPQLPDGRFQPPMAL
ECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHH
NAVERHVRQVVADRYGRCMTVGRVANMTQAKPDEGRSACQNRSICARGCSYGAYFSTQSS
HHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCC
TLPAAKATGNLTVVTDAIVEHVDYDPATKRVTGVRYVNTKDGSRGSATARMVFLNASAFN
CCCCHHCCCCEEEEEHHHHHHCCCCCCHHHEEEEEEEECCCCCCCCCEEEEEEEECCCCC
SVHVLLNSRSEAMPNGLGNSSGVLGTQIMDHANTLSTIALFPQFNGRTSFGNRPTGVVIA
EEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCEEEE
RYRNMDEMDGAGHTRGYSYQGGALQSNWGAGKREAGIGADFKDKLRTPGMWRMVLVAFAD
EECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHH
CVPRDSNRLTLDPVKTDRFGIPQLRIDFAYGKEEQAALAQAKADAAEMMTAAGGMVVMGS
HCCCCCCEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECC
DQPGTGGMAIHEMGGARMGHDPKTSVLNKWSQSHDVANLFVTDGAQMASSACQNPSLTYM
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCEEEE
ALTARACDAAVRMLREGAI
EEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]