| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is qor [H]
Identifier: 87199196
GI number: 87199196
Start: 1214075
End: 1215076
Strand: Direct
Name: qor [H]
Synonym: Saro_1174
Alternate gene names: 87199196
Gene position: 1214075-1215076 (Clockwise)
Preceding gene: 87199195
Following gene: 87199208
Centisome position: 34.09
GC content: 68.56
Gene sequence:
>1002_bases ATGAAGGCTCTGCGCACCCACGCGGCAGGCGGCCCCGAAACCCTCGTGCTCGACGATCTGCCCGATCCGGTGCCGGGCAA GGGCGAAGTGCTGGTGCGGGTCCATGCCTGCTCGATAAACTTCCCCGACACCCTGATGATCCGCGACCTCTACCAGTTCC GGCCCGAGCGCCCCTATGCGCCGGGCAGCGAACTGGCGGGCGAGATCGAGGCGCTGGGCGAGGGCGTCACCGGCTGGAAG GTTGGCGACCGCGTAATCGCGATGATCGGCAGCGGCGGCCTTGCCGAAAAGGTCATTGCCCCGGTCGCGCGCCTGTTTCC GCTGCCCGACGGCGTCGACTACGCCACCGGCGCCTCACTGCTGATGACCTACGGCACGACGATCCACGGCCTCAAGGATC GCGGCCATATCAAGGCCGGCGACACGGTGCTCGTCCTCGGCGCGGCTGGCGGCGTCGGGCTTTCGGCCGTCGAACTCGCC AAGGCCTTCGGCGCCCGCGTCATCGCCGCCGTGTCGAGCGAGGAGAAGGCGCAGGTCGTGCGCGAGGCCGGCGCTGACGA CGTCGTCATCTACGGCCGGCCGCCTTTCGACAAGGCCCAGTCCAAGGCGCTGGCCGACCAGTTCAAGGCCGCCTGCGGCC CGAACGGCGCGGACATCGTCTACGATATCGTCGGCGGCGACTATTCCGAGCCCGCCCTGCGTGCCATCGCATGGGAGGGC CGTTTCCTCGTGGTCGGCTTCCCGGCGGGCATCGCCAAGCTCCCGCTCAACCTCACGTTGCTCAAGTCCTGCGACGTCTG CGGCGTGTTCTGGGGGGCGTGGACCGCGCGCGAACCCGCCGCCTTCAAGGCCGAGGTCGAGGAACTGTTCGCCCTGCTCA AGGCCGGCAAGATCAACCCACGCGTCTCGCAGCGCTTCTCGCTCGAACAGGGCCGCGAAGCCATCGCCACGCTGGAAAAC CGGCAGGCCATGGGCAAGGTCGTCGTTGAAATGATCGGCTGA
Upstream 100 bases:
>100_bases GCAGCTTAAGTGCTCGGTTAAGGGGGCTTCCCAAGCCGTCCAAAACTTGCTTCCCTGTGGCCAAGCGGACCGATTCCGCA TGGCTTAGGGAGAATGAACG
Downstream 100 bases:
>100_bases CGGCACTCTCGCCCCTCCCGCTTGCGGGAGGGGGCGGAGGACGCCGTGGTCAGCCCTCGCGCTCCGCCGAATATGTCGGC AAGCCCAGTCGCCACCAGAT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKALRTHAAGGPETLVLDDLPDPVPGKGEVLVRVHACSINFPDTLMIRDLYQFRPERPYAPGSELAGEIEALGEGVTGWK VGDRVIAMIGSGGLAEKVIAPVARLFPLPDGVDYATGASLLMTYGTTIHGLKDRGHIKAGDTVLVLGAAGGVGLSAVELA KAFGARVIAAVSSEEKAQVVREAGADDVVIYGRPPFDKAQSKALADQFKAACGPNGADIVYDIVGGDYSEPALRAIAWEG RFLVVGFPAGIAKLPLNLTLLKSCDVCGVFWGAWTAREPAAFKAEVEELFALLKAGKINPRVSQRFSLEQGREAIATLEN RQAMGKVVVEMIG
Sequences:
>Translated_333_residues MKALRTHAAGGPETLVLDDLPDPVPGKGEVLVRVHACSINFPDTLMIRDLYQFRPERPYAPGSELAGEIEALGEGVTGWK VGDRVIAMIGSGGLAEKVIAPVARLFPLPDGVDYATGASLLMTYGTTIHGLKDRGHIKAGDTVLVLGAAGGVGLSAVELA KAFGARVIAAVSSEEKAQVVREAGADDVVIYGRPPFDKAQSKALADQFKAACGPNGADIVYDIVGGDYSEPALRAIAWEG RFLVVGFPAGIAKLPLNLTLLKSCDVCGVFWGAWTAREPAAFKAEVEELFALLKAGKINPRVSQRFSLEQGREAIATLEN RQAMGKVVVEMIG >Mature_333_residues MKALRTHAAGGPETLVLDDLPDPVPGKGEVLVRVHACSINFPDTLMIRDLYQFRPERPYAPGSELAGEIEALGEGVTGWK VGDRVIAMIGSGGLAEKVIAPVARLFPLPDGVDYATGASLLMTYGTTIHGLKDRGHIKAGDTVLVLGAAGGVGLSAVELA KAFGARVIAAVSSEEKAQVVREAGADDVVIYGRPPFDKAQSKALADQFKAACGPNGADIVYDIVGGDYSEPALRAIAWEG RFLVVGFPAGIAKLPLNLTLLKSCDVCGVFWGAWTAREPAAFKAEVEELFALLKAGKINPRVSQRFSLEQGREAIATLEN RQAMGKVVVEMIG
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=332, Percent_Identity=32.5301204819277, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI13236495, Length=332, Percent_Identity=32.5301204819277, Blast_Score=162, Evalue=3e-40, Organism=Homo sapiens, GI194239676, Length=190, Percent_Identity=39.4736842105263, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI22538446, Length=344, Percent_Identity=28.1976744186047, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI22538444, Length=344, Percent_Identity=28.1976744186047, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI18379349, Length=318, Percent_Identity=28.9308176100629, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI28557745, Length=332, Percent_Identity=30.7228915662651, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI24308257, Length=353, Percent_Identity=24.6458923512748, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI47519420, Length=340, Percent_Identity=29.4117647058824, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI67078404, Length=298, Percent_Identity=26.510067114094, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI41872631, Length=311, Percent_Identity=25.08038585209, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI67078406, Length=290, Percent_Identity=26.551724137931, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI197927207, Length=178, Percent_Identity=29.2134831460674, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1790485, Length=328, Percent_Identity=31.4024390243902, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI87082125, Length=373, Percent_Identity=28.1501340482574, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI226510941, Length=348, Percent_Identity=25.5747126436782, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789651, Length=223, Percent_Identity=30.0448430493274, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17507255, Length=334, Percent_Identity=29.3413173652695, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17536829, Length=304, Percent_Identity=25.3289473684211, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=340, Percent_Identity=28.5294117647059, Blast_Score=131, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322619, Length=289, Percent_Identity=26.9896193771626, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319955, Length=289, Percent_Identity=26.9896193771626, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI24581345, Length=258, Percent_Identity=24.4186046511628, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI45550423, Length=311, Percent_Identity=25.08038585209, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI19920632, Length=259, Percent_Identity=22.7799227799228, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI221330659, Length=259, Percent_Identity=22.7799227799228, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35105; Mature: 35105
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALRTHAAGGPETLVLDDLPDPVPGKGEVLVRVHACSINFPDTLMIRDLYQFRPERPYA CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCC PGSELAGEIEALGEGVTGWKVGDRVIAMIGSGGLAEKVIAPVARLFPLPDGVDYATGASL CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH LMTYGTTIHGLKDRGHIKAGDTVLVLGAAGGVGLSAVELAKAFGARVIAAVSSEEKAQVV HHHHCCEEECCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH REAGADDVVIYGRPPFDKAQSKALADQFKAACGPNGADIVYDIVGGDYSEPALRAIAWEG HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHEEEECC RFLVVGFPAGIAKLPLNLTLLKSCDVCGVFWGAWTAREPAAFKAEVEELFALLKAGKINP EEEEEECCCCHHHCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC RVSQRFSLEQGREAIATLENRQAMGKVVVEMIG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKALRTHAAGGPETLVLDDLPDPVPGKGEVLVRVHACSINFPDTLMIRDLYQFRPERPYA CCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCC PGSELAGEIEALGEGVTGWKVGDRVIAMIGSGGLAEKVIAPVARLFPLPDGVDYATGASL CCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH LMTYGTTIHGLKDRGHIKAGDTVLVLGAAGGVGLSAVELAKAFGARVIAAVSSEEKAQVV HHHHCCEEECCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHHEEEEECCCHHHHHHH REAGADDVVIYGRPPFDKAQSKALADQFKAACGPNGADIVYDIVGGDYSEPALRAIAWEG HHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHEEEECC RFLVVGFPAGIAKLPLNLTLLKSCDVCGVFWGAWTAREPAAFKAEVEELFALLKAGKINP EEEEEECCCCHHHCCCCEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC RVSQRFSLEQGREAIATLENRQAMGKVVVEMIG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]