| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199193
Identifier: 87199193
GI number: 87199193
Start: 1212058
End: 1212588
Strand: Direct
Name: 87199193
Synonym: Saro_1171
Alternate gene names: NA
Gene position: 1212058-1212588 (Clockwise)
Preceding gene: 87199192
Following gene: 87199194
Centisome position: 34.03
GC content: 69.11
Gene sequence:
>531_bases ATGCCGGCACTTCCGACAGCCGCGCTCCAGCTCGCGGGGTTCCTCATGGCCCATGCGTTCTGGACGGCGTCGGATCTGCC GCCCGGCGGCCATTATCAGCCCCAGTCGCTGTGCATGCGCGCCGATGGCAACCGCGTCCTCAACAGCTTCGACGGGACCA ACCCCAAGGAACAGGACGAAGCCGCGCGCGCCTTCGTCACCGGCGGCGCGGCGCAGTGGCCCGATTGCGCCATCGCGCGG CAGGTCAAGGTCGGAACGCCAACGGGCGACGTCGACGCGCTCGTCATCGATGTCGTCCAGTATGGCGGCAGCGTGATGAC CGTCGTCCAGGCCTTTCGCCCCGCTGACAAGGGCTTCCGCCTGCTCGGCGACGAACTGATGCTGGGCGACAACGGCCCGC TCCCGCCGCTTCCCGCAGCGCAGGCCGCCGCCGCCATGCGCGAAGGGGCGCTCGACCATCCCGGTATGGACGGCAAGTGG AATCAGTGGGAAACGGAACGCGATCCGGTGAGCCCGCTGGTCGAGCGTTGA
Upstream 100 bases:
>100_bases CCCGGCGCGCGCACGCACCTCGTCAGCCCGGCGATGGCGGCGGCCGCTGCCGTTACCGGCAGGCTGACGGACGTGCGCAA GCTGATGGCCTGACGCGGAA
Downstream 100 bases:
>100_bases CGCAGGCCGAAGGGCGCAAGTCGTCCTTTGCCCCGGTCGTCGATGAACGCACCAGGGTCCTGATCCTCGGCAGTCTGCCC GGCGAGGCAAGCCTGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPALPTAALQLAGFLMAHAFWTASDLPPGGHYQPQSLCMRADGNRVLNSFDGTNPKEQDEAARAFVTGGAAQWPDCAIAR QVKVGTPTGDVDALVIDVVQYGGSVMTVVQAFRPADKGFRLLGDELMLGDNGPLPPLPAAQAAAAMREGALDHPGMDGKW NQWETERDPVSPLVER
Sequences:
>Translated_176_residues MPALPTAALQLAGFLMAHAFWTASDLPPGGHYQPQSLCMRADGNRVLNSFDGTNPKEQDEAARAFVTGGAAQWPDCAIAR QVKVGTPTGDVDALVIDVVQYGGSVMTVVQAFRPADKGFRLLGDELMLGDNGPLPPLPAAQAAAAMREGALDHPGMDGKW NQWETERDPVSPLVER >Mature_175_residues PALPTAALQLAGFLMAHAFWTASDLPPGGHYQPQSLCMRADGNRVLNSFDGTNPKEQDEAARAFVTGGAAQWPDCAIARQ VKVGTPTGDVDALVIDVVQYGGSVMTVVQAFRPADKGFRLLGDELMLGDNGPLPPLPAAQAAAAMREGALDHPGMDGKWN QWETERDPVSPLVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18721; Mature: 18590
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALPTAALQLAGFLMAHAFWTASDLPPGGHYQPQSLCMRADGNRVLNSFDGTNPKEQDE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHH AARAFVTGGAAQWPDCAIARQVKVGTPTGDVDALVIDVVQYGGSVMTVVQAFRPADKGFR HHHHHHCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHH LLGDELMLGDNGPLPPLPAAQAAAAMREGALDHPGMDGKWNQWETERDPVSPLVER HHCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure PALPTAALQLAGFLMAHAFWTASDLPPGGHYQPQSLCMRADGNRVLNSFDGTNPKEQDE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHH AARAFVTGGAAQWPDCAIARQVKVGTPTGDVDALVIDVVQYGGSVMTVVQAFRPADKGFR HHHHHHCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCHH LLGDELMLGDNGPLPPLPAAQAAAAMREGALDHPGMDGKWNQWETERDPVSPLVER HHCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA