| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is exoZ [H]
Identifier: 87199188
GI number: 87199188
Start: 1207735
End: 1208808
Strand: Direct
Name: exoZ [H]
Synonym: Saro_1166
Alternate gene names: 87199188
Gene position: 1207735-1208808 (Clockwise)
Preceding gene: 87199187
Following gene: 87199189
Centisome position: 33.91
GC content: 68.9
Gene sequence:
>1074_bases ATGACGGCAACGGGCGACGGGCAGCCCCGAATCGTATCGGTGCAGATGCTGCGTTTCGTCGCGGCCTTCGCGGTCCTCGC GTTCCATGCAGAGATATTCGCCTATTATCTCGGCCAGTTCCGTGGCGTGAACCTGGAAAGGCCGGGCTTCCTCGCGGCGG GCGGGGCGGGGGTCGATCTCTTCTTCGCCATATCCGGTTTCGTCATGGTCGTTTCGATGCAGCCCGTCTTCGGCCGGACC GGGGCCCGCCGCCATTTCCTCGTCCGCCGGATCGTCCGCATCGTGCCGCTCTACTGGGCCGCGACGCTGGGCCTCGTCGC CTGGCGTATGCGCTTCGCCGTCCCGCCGGATCTTGCCTCGACGCTCAGCGCGCTGGCCTTCATTCCCCATCCGCTCGAGA CCGCCCACGGACGCATGGTGCCGCCGATCGAAGCCGGCTGGACGCTCAACTTCGAGATGCTGTTCTACGCGCTCTTCGCC GGATGCCTCGCCTCGGGGGCGCGTTCGACGGTACTTCGTGTCGGCGCCGCGCTGGCGCTCGGGGTGCTGGCCGGAGCTCT CCTCCCGCTGCCGCAGCCGCTGGCGTTCTGGACCGATCCGATGGTCCTCGAATTCGCTGGCGGAATGGCGCTCGCGCTTG TCTACCACGCCGGCACGCGCCTGCCGGTGCCTGTCCGGCTGGCGATGGCGGGCGCGGCACTGGCGTTGATCCTTCCCGAC CACGCGGGCCTACTGCCGGATTTTCCGGCATGGAAGCGGCTGCTGACCTGGGGCGTCGCCGGCTGGCTCCTTCTCGCCGC GACCGTCCTCGGCCCGTTCACCTTGCCCGCGCCCGGCCTTTGGCGGCTCGGGGGCGACATCTCCTACGCGGTCTACATTG TCCACATGCCGCTGATGGAAGTGGTCCAGACGGTCTGGCGGCATTTCCGCTGGCCATATGGAGCGCTGGGCGAGGCGGTC TTCGTCACCGGCACGATGGCGGGCTCGCTCGTCGCGGGCCTGGTACTCCACCGCTGGCTGGAAAAGCCCGTCGGTCGATG GCTGCGCGCCGTGGCGGAGCCGCGAAGTGGCTGA
Upstream 100 bases:
>100_bases CGGGCGTGCTCCTTACCGCCGTGACGGCCGGGTGGCCCTGGGTGCTCATGCCCGCCGCGGTCCTCGGCGTGACCGGCACA TGGATCTGGACCCGCGCCGA
Downstream 100 bases:
>100_bases ATAAGTTCTTGTTTTGTTCTTTTTCTGCTATGGGCGGGTTCACGGATTCGCTGGCGGAGAAGGAATGTGATCACATTGAC GGTCGGGCAGGGCAGCGGGG
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTATGDGQPRIVSVQMLRFVAAFAVLAFHAEIFAYYLGQFRGVNLERPGFLAAGGAGVDLFFAISGFVMVVSMQPVFGRT GARRHFLVRRIVRIVPLYWAATLGLVAWRMRFAVPPDLASTLSALAFIPHPLETAHGRMVPPIEAGWTLNFEMLFYALFA GCLASGARSTVLRVGAALALGVLAGALLPLPQPLAFWTDPMVLEFAGGMALALVYHAGTRLPVPVRLAMAGAALALILPD HAGLLPDFPAWKRLLTWGVAGWLLLAATVLGPFTLPAPGLWRLGGDISYAVYIVHMPLMEVVQTVWRHFRWPYGALGEAV FVTGTMAGSLVAGLVLHRWLEKPVGRWLRAVAEPRSG
Sequences:
>Translated_357_residues MTATGDGQPRIVSVQMLRFVAAFAVLAFHAEIFAYYLGQFRGVNLERPGFLAAGGAGVDLFFAISGFVMVVSMQPVFGRT GARRHFLVRRIVRIVPLYWAATLGLVAWRMRFAVPPDLASTLSALAFIPHPLETAHGRMVPPIEAGWTLNFEMLFYALFA GCLASGARSTVLRVGAALALGVLAGALLPLPQPLAFWTDPMVLEFAGGMALALVYHAGTRLPVPVRLAMAGAALALILPD HAGLLPDFPAWKRLLTWGVAGWLLLAATVLGPFTLPAPGLWRLGGDISYAVYIVHMPLMEVVQTVWRHFRWPYGALGEAV FVTGTMAGSLVAGLVLHRWLEKPVGRWLRAVAEPRSG >Mature_356_residues TATGDGQPRIVSVQMLRFVAAFAVLAFHAEIFAYYLGQFRGVNLERPGFLAAGGAGVDLFFAISGFVMVVSMQPVFGRTG ARRHFLVRRIVRIVPLYWAATLGLVAWRMRFAVPPDLASTLSALAFIPHPLETAHGRMVPPIEAGWTLNFEMLFYALFAG CLASGARSTVLRVGAALALGVLAGALLPLPQPLAFWTDPMVLEFAGGMALALVYHAGTRLPVPVRLAMAGAALALILPDH AGLLPDFPAWKRLLTWGVAGWLLLAATVLGPFTLPAPGLWRLGGDISYAVYIVHMPLMEVVQTVWRHFRWPYGALGEAVF VTGTMAGSLVAGLVLHRWLEKPVGRWLRAVAEPRSG
Specific function: Required for the acetyl modification of the third sugar (glucose) of the octasaccharide subunit of succinoglycan (EPS I) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 38570; Mature: 38439
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATGDGQPRIVSVQMLRFVAAFAVLAFHAEIFAYYLGQFRGVNLERPGFLAAGGAGVDL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH FFAISGFVMVVSMQPVFGRTGARRHFLVRRIVRIVPLYWAATLGLVAWRMRFAVPPDLAS HHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLSALAFIPHPLETAHGRMVPPIEAGWTLNFEMLFYALFAGCLASGARSTVLRVGAALAL HHHHHHHCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GVLAGALLPLPQPLAFWTDPMVLEFAGGMALALVYHAGTRLPVPVRLAMAGAALALILPD HHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECC HAGLLPDFPAWKRLLTWGVAGWLLLAATVLGPFTLPAPGLWRLGGDISYAVYIVHMPLME CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH VVQTVWRHFRWPYGALGEAVFVTGTMAGSLVAGLVLHRWLEKPVGRWLRAVAEPRSG HHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TATGDGQPRIVSVQMLRFVAAFAVLAFHAEIFAYYLGQFRGVNLERPGFLAAGGAGVDL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHH FFAISGFVMVVSMQPVFGRTGARRHFLVRRIVRIVPLYWAATLGLVAWRMRFAVPPDLAS HHHHHHHHHEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TLSALAFIPHPLETAHGRMVPPIEAGWTLNFEMLFYALFAGCLASGARSTVLRVGAALAL HHHHHHHCCCCHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GVLAGALLPLPQPLAFWTDPMVLEFAGGMALALVYHAGTRLPVPVRLAMAGAALALILPD HHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECC HAGLLPDFPAWKRLLTWGVAGWLLLAATVLGPFTLPAPGLWRLGGDISYAVYIVHMPLME CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH VVQTVWRHFRWPYGALGEAVFVTGTMAGSLVAGLVLHRWLEKPVGRWLRAVAEPRSG HHHHHHHHHCCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1787800; 11481431; 8439670 [H]