| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199189
Identifier: 87199189
GI number: 87199189
Start: 1208875
End: 1209450
Strand: Direct
Name: 87199189
Synonym: Saro_1167
Alternate gene names: NA
Gene position: 1208875-1209450 (Clockwise)
Preceding gene: 87199188
Following gene: 87199191
Centisome position: 33.94
GC content: 67.36
Gene sequence:
>576_bases GTGATCACATTGACGGTCGGGCAGGGCAGCGGGGGGCAGGACTGGCTGGCATGGTCGGCAACGGTCCTCGGCGCGCTTGC CTGGCCGGTCGCCGCGTTCGTGATCGCGCTCCTTTTCCGCCCCCACCTGACGACCCTGCTTGGCCGGCTCGACGAACTGA GCTGGGGCGACAAGTCCGCCCGCTTCGCCCGCAAGCTCGACCGGCTCGAATCCGAAGCTCCCCCGGTTCCCACGGCGCCC GACAGCGGCCCGGAAATCGCCCTTTCCGGCGATCATGGCCGGTTTCTTCAGCTTCTTGATCTGTCGCCCAACGCGGCCGT GCTGGATTCGTGGTCGCGCGTCGAGGAAGCCTTGCAGGCGCTCGCCCATGCGCACCAGTTGGCCAGCGCCGACGCTGCGG ACGCGGGACGTGCGCTTCAGAAGCGCGGCATCCTGCCGGCCCGGACCATTGGCATGATCGGCGAAATGCGCCGCCTCAGG AATGCGGCTGCCCACAATCAGGACATATCCGTTTCGGACGCCTTGCGCTTCCGCAACCTCGCGAAGGGCGTGCTGAACGA GATCAGACTGGCGTAA
Upstream 100 bases:
>100_bases GCTGCGCGCCGTGGCGGAGCCGCGAAGTGGCTGAATAAGTTCTTGTTTTGTTCTTTTTCTGCTATGGGCGGGTTCACGGA TTCGCTGGCGGAGAAGGAAT
Downstream 100 bases:
>100_bases GAACGTCTCGAACGCCGCCTAGCCGTCCACTGCCTCGCGCAGAACGGCGATGCCTGCCTCGCGCTGGGCCCGCAGTTCCT GCTTCAGCACCGCAGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MITLTVGQGSGGQDWLAWSATVLGALAWPVAAFVIALLFRPHLTTLLGRLDELSWGDKSARFARKLDRLESEAPPVPTAP DSGPEIALSGDHGRFLQLLDLSPNAAVLDSWSRVEEALQALAHAHQLASADAADAGRALQKRGILPARTIGMIGEMRRLR NAAAHNQDISVSDALRFRNLAKGVLNEIRLA
Sequences:
>Translated_191_residues MITLTVGQGSGGQDWLAWSATVLGALAWPVAAFVIALLFRPHLTTLLGRLDELSWGDKSARFARKLDRLESEAPPVPTAP DSGPEIALSGDHGRFLQLLDLSPNAAVLDSWSRVEEALQALAHAHQLASADAADAGRALQKRGILPARTIGMIGEMRRLR NAAAHNQDISVSDALRFRNLAKGVLNEIRLA >Mature_191_residues MITLTVGQGSGGQDWLAWSATVLGALAWPVAAFVIALLFRPHLTTLLGRLDELSWGDKSARFARKLDRLESEAPPVPTAP DSGPEIALSGDHGRFLQLLDLSPNAAVLDSWSRVEEALQALAHAHQLASADAADAGRALQKRGILPARTIGMIGEMRRLR NAAAHNQDISVSDALRFRNLAKGVLNEIRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20510; Mature: 20510
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLTVGQGSGGQDWLAWSATVLGALAWPVAAFVIALLFRPHLTTLLGRLDELSWGDKSA CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RFARKLDRLESEAPPVPTAPDSGPEIALSGDHGRFLQLLDLSPNAAVLDSWSRVEEALQA HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LAHAHQLASADAADAGRALQKRGILPARTIGMIGEMRRLRNAAAHNQDISVSDALRFRNL HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKGVLNEIRLA HHHHHHHHCCC >Mature Secondary Structure MITLTVGQGSGGQDWLAWSATVLGALAWPVAAFVIALLFRPHLTTLLGRLDELSWGDKSA CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH RFARKLDRLESEAPPVPTAPDSGPEIALSGDHGRFLQLLDLSPNAAVLDSWSRVEEALQA HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHH LAHAHQLASADAADAGRALQKRGILPARTIGMIGEMRRLRNAAAHNQDISVSDALRFRNL HHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKGVLNEIRLA HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA