| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199133
Identifier: 87199133
GI number: 87199133
Start: 1158645
End: 1159451
Strand: Reverse
Name: 87199133
Synonym: Saro_1111
Alternate gene names: NA
Gene position: 1159451-1158645 (Counterclockwise)
Preceding gene: 87199137
Following gene: 87199132
Centisome position: 32.55
GC content: 65.43
Gene sequence:
>807_bases ATGCGCCCGACCACGCTCCTGCCCCTCGCGCTGCTCGCGGCCTGTTCAGCACCCGATGACCCGAAAGCGACCCGAAGTGC ACCTGAGGCGACATCGACCGCACCCGAAGCGCCGCAACCGCCTACCCAGACGCCGGTGACCGCACGCGACGTGCACGAGG ACAACGACCTCTACGTCTTCGACTATTCCTACCCCGCCGCCGCCGGTGCGATTCCCGCGCTCAAGGACCTGCTCGACAAG GAGCTTGAAAAGGCACGCGCCGACCTCAAGGCCGAGGCGGCTAATGGGCGGGCGGAAGCCAAGGCCAACGATTTCCCCTA TCATCCCCACAGCCACAGCGTGGAATGGAAGGTGGTGACCGACCTTCCGGCCTGGCTCAGCCTGTCCACTCTTGTCGGCT TCTACTCTGGCGGCGCGCATCCGAACTACGCCTACGACACCATCCTGTGGGACAGGATCGCCGGGAAGCGGCGTGCGCCC GTGGATCTCTTCACGTCCAAGGCCGCGCTGTCTGCCGCGATCCGGGCCCCCTTCTGCAAGGAACTCGACCGCCAGCGCGC GAAGAAGCGGGAAGGCTACGAACCGGGCGGCGGCATCCCCGAATTCGAGGAATGCATCGATCCGGCAGAGCAAACGGTGA TCCTCGGGTCATCGAACGGCAAGGCGTTCGACCGCATCGGCGTACTCGTCGCGCCCTATGCGGCAGGACCCTATGCCGAA GGCGACTATGAAGTGACGGTTCCGGTCTCCGCCAAGGTCCTCGCGGCCGTGAAGCCCGAATTCAAGGGCACCTTCGTCGC ACGATGA
Upstream 100 bases:
>100_bases GCCTGCTGGCCGCGATCAGGCTGGATCAGCGCGTTCTTGTCCGTCATCTTGCATCGGACAATGCCGCAGAGCGCGGCCCG TTGCGAGAGGAAATTGCCCC
Downstream 100 bases:
>100_bases AACACGCCCGCGCGAATGGCTCGCATTTTGGGCGATGGATCGCTACATGGCGCCCATGACCGAATACGTTACAGTCGAAG ACCACAGCGTCCTGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE GDYEVTVPVSAKVLAAVKPEFKGTFVAR
Sequences:
>Translated_268_residues MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE GDYEVTVPVSAKVLAAVKPEFKGTFVAR >Mature_268_residues MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE GDYEVTVPVSAKVLAAVKPEFKGTFVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28823; Mature: 28823
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVF CCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE DYSYPAAAGAIPALKDLLDKELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVT ECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE DLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAPVDLFTSKAALSAAIRAPFCK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHH ELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHCEEEECCCCCCCCC GDYEVTVPVSAKVLAAVKPEFKGTFVAR CCEEEEECCCCEEHHHHCCCCCEEEECC >Mature Secondary Structure MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVF CCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE DYSYPAAAGAIPALKDLLDKELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVT ECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE DLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAPVDLFTSKAALSAAIRAPFCK CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHH ELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHCEEEECCCCCCCCC GDYEVTVPVSAKVLAAVKPEFKGTFVAR CCEEEEECCCCEEHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA