Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199133

Identifier: 87199133

GI number: 87199133

Start: 1158645

End: 1159451

Strand: Reverse

Name: 87199133

Synonym: Saro_1111

Alternate gene names: NA

Gene position: 1159451-1158645 (Counterclockwise)

Preceding gene: 87199137

Following gene: 87199132

Centisome position: 32.55

GC content: 65.43

Gene sequence:

>807_bases
ATGCGCCCGACCACGCTCCTGCCCCTCGCGCTGCTCGCGGCCTGTTCAGCACCCGATGACCCGAAAGCGACCCGAAGTGC
ACCTGAGGCGACATCGACCGCACCCGAAGCGCCGCAACCGCCTACCCAGACGCCGGTGACCGCACGCGACGTGCACGAGG
ACAACGACCTCTACGTCTTCGACTATTCCTACCCCGCCGCCGCCGGTGCGATTCCCGCGCTCAAGGACCTGCTCGACAAG
GAGCTTGAAAAGGCACGCGCCGACCTCAAGGCCGAGGCGGCTAATGGGCGGGCGGAAGCCAAGGCCAACGATTTCCCCTA
TCATCCCCACAGCCACAGCGTGGAATGGAAGGTGGTGACCGACCTTCCGGCCTGGCTCAGCCTGTCCACTCTTGTCGGCT
TCTACTCTGGCGGCGCGCATCCGAACTACGCCTACGACACCATCCTGTGGGACAGGATCGCCGGGAAGCGGCGTGCGCCC
GTGGATCTCTTCACGTCCAAGGCCGCGCTGTCTGCCGCGATCCGGGCCCCCTTCTGCAAGGAACTCGACCGCCAGCGCGC
GAAGAAGCGGGAAGGCTACGAACCGGGCGGCGGCATCCCCGAATTCGAGGAATGCATCGATCCGGCAGAGCAAACGGTGA
TCCTCGGGTCATCGAACGGCAAGGCGTTCGACCGCATCGGCGTACTCGTCGCGCCCTATGCGGCAGGACCCTATGCCGAA
GGCGACTATGAAGTGACGGTTCCGGTCTCCGCCAAGGTCCTCGCGGCCGTGAAGCCCGAATTCAAGGGCACCTTCGTCGC
ACGATGA

Upstream 100 bases:

>100_bases
GCCTGCTGGCCGCGATCAGGCTGGATCAGCGCGTTCTTGTCCGTCATCTTGCATCGGACAATGCCGCAGAGCGCGGCCCG
TTGCGAGAGGAAATTGCCCC

Downstream 100 bases:

>100_bases
AACACGCCCGCGCGAATGGCTCGCATTTTGGGCGATGGATCGCTACATGGCGCCCATGACCGAATACGTTACAGTCGAAG
ACCACAGCGTCCTGCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK
ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP
VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE
GDYEVTVPVSAKVLAAVKPEFKGTFVAR

Sequences:

>Translated_268_residues
MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK
ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP
VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE
GDYEVTVPVSAKVLAAVKPEFKGTFVAR
>Mature_268_residues
MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVFDYSYPAAAGAIPALKDLLDK
ELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVTDLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAP
VDLFTSKAALSAAIRAPFCKELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE
GDYEVTVPVSAKVLAAVKPEFKGTFVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28823; Mature: 28823

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVF
CCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE
DYSYPAAAGAIPALKDLLDKELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVT
ECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE
DLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAPVDLFTSKAALSAAIRAPFCK
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHH
ELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHCEEEECCCCCCCCC
GDYEVTVPVSAKVLAAVKPEFKGTFVAR
CCEEEEECCCCEEHHHHCCCCCEEEECC
>Mature Secondary Structure
MRPTTLLPLALLAACSAPDDPKATRSAPEATSTAPEAPQPPTQTPVTARDVHEDNDLYVF
CCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEE
DYSYPAAAGAIPALKDLLDKELEKARADLKAEAANGRAEAKANDFPYHPHSHSVEWKVVT
ECCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEE
DLPAWLSLSTLVGFYSGGAHPNYAYDTILWDRIAGKRRAPVDLFTSKAALSAAIRAPFCK
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHH
ELDRQRAKKREGYEPGGGIPEFEECIDPAEQTVILGSSNGKAFDRIGVLVAPYAAGPYAE
HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHCEEEECCCCCCCCC
GDYEVTVPVSAKVLAAVKPEFKGTFVAR
CCEEEEECCCCEEHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA