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The map label for this gene is yhgI [C]

Identifier: 87199010

GI number: 87199010

Start: 1029983

End: 1030570

Strand: Reverse

Name: yhgI [C]

Synonym: Saro_0988

Alternate gene names: 87199010

Gene position: 1030570-1029983 (Counterclockwise)

Preceding gene: 87199014

Following gene: 87199009

Centisome position: 28.94

GC content: 64.63

Gene sequence:

>588_bases
ATGCGAATCATGTTCATCGAGACCGAAACCACGCCCAATCCCGCCACGCTCAAGTTCCTCCCGGGCGAGCAGGTGATGGC
GTCCGGCACGCGCGAGTTCGTATCGCACGAAGAGGCCGAGGCATCGCCCCTTGCACAGGCGCTGTTCGACCTTGGCGACG
TGACCGGCGTCCTGTTCGGGCGTGACTTCGTGTCCGTCACTGCCGCCCCCGGCGTCGCCTGGGCGGATCTCAAGCCGCAG
GTACTTTCGCTGCTGCTAGACCACTTCGTTGCGCAGGCTCCGCTGTTCGCTCCCGGTTCTGCCGGCGGGATCGTGGTTCC
TGCCGATGCCGACGAAGACTTCGCCGACGATCCGGCCGATGCTGACATCATCGACCAGATCAAGGACCTGATCGAGACGC
GGGTGCGGCCTGCGGTCGCAAACGATGGTGGCGACATCATCTACAGGGGCTTCCGCGAAGGCGTGGTCTATCTCAAGATG
CAGGGCGCCTGCTCTGGCTGCCCGTCCTCCACGGCGACGCTCAAGAACGGCATCGAGAGCCTGCTCAAGCACTACGTCCC
CGAAGTGAGCGAAGTCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
TCCCGCGCCATGCGGACTGCAACAAAAATTCGGGAAATGCGTACCGCATCACGCAAACCAGCGACTTTCGTCCACTTGAC
CCCGCCCGTCGGCGGCCTAC

Downstream 100 bases:

>100_bases
GGCCGGTCCCGATCGCATGCGAAGGCTCGTAATCGACAGCGCGACGGAAAACTGCTCGGTCGCCCTGATCGACAACGGCG
AGCTTGTCGCCGGGGAATGC

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU-Like; Nitrogen-Fixing NifU Domain Protein; Nitrogen Fixation Protein; NifU-Like Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; NifU-Like Domain Protein; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; NifU Related Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Scaffold Protein Nfu/Nifu; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; Thioredoxin

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MRIMFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFGRDFVSVTAAPGVAWADLKPQ
VLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPADADIIDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKM
QGACSGCPSSTATLKNGIESLLKHYVPEVSEVRAA

Sequences:

>Translated_195_residues
MRIMFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFGRDFVSVTAAPGVAWADLKPQ
VLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPADADIIDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKM
QGACSGCPSSTATLKNGIESLLKHYVPEVSEVRAA
>Mature_195_residues
MRIMFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFGRDFVSVTAAPGVAWADLKPQ
VLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPADADIIDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKM
QGACSGCPSSTATLKNGIESLLKHYVPEVSEVRAA

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593021, Length=193, Percent_Identity=43.0051813471503, Blast_Score=166, Evalue=1e-41,
Organism=Homo sapiens, GI50593025, Length=193, Percent_Identity=43.0051813471503, Blast_Score=166, Evalue=1e-41,
Organism=Homo sapiens, GI50593023, Length=74, Percent_Identity=54.0540540540541, Blast_Score=100, Evalue=7e-22,
Organism=Homo sapiens, GI50593019, Length=74, Percent_Identity=54.0540540540541, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17541876, Length=194, Percent_Identity=46.9072164948454, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6322811, Length=210, Percent_Identity=38.0952380952381, Blast_Score=132, Evalue=3e-32,
Organism=Drosophila melanogaster, GI45551492, Length=192, Percent_Identity=44.2708333333333, Blast_Score=173, Evalue=8e-44,
Organism=Drosophila melanogaster, GI24643765, Length=192, Percent_Identity=44.2708333333333, Blast_Score=173, Evalue=8e-44,
Organism=Drosophila melanogaster, GI45556188, Length=192, Percent_Identity=44.2708333333333, Blast_Score=173, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20719; Mature: 20719

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFG
CEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
RDFVSVTAAPGVAWADLKPQVLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPAD
CHHHEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC
ADIIDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKMQGACSGCPSSTATLKNGIES
HHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHH
LLKHYVPEVSEVRAA
HHHHHCCCHHHHCCC
>Mature Secondary Structure
MRIMFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFG
CEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
RDFVSVTAAPGVAWADLKPQVLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPAD
CHHHEEECCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCC
ADIIDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKMQGACSGCPSSTATLKNGIES
HHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHH
LLKHYVPEVSEVRAA
HHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA