Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yeaZ [C]

Identifier: 87199009

GI number: 87199009

Start: 1029346

End: 1029966

Strand: Reverse

Name: yeaZ [C]

Synonym: Saro_0987

Alternate gene names: 87199009

Gene position: 1029966-1029346 (Counterclockwise)

Preceding gene: 87199010

Following gene: 87199008

Centisome position: 28.92

GC content: 67.31

Gene sequence:

>621_bases
ATGCGAAGGCTCGTAATCGACAGCGCGACGGAAAACTGCTCGGTCGCCCTGATCGACAACGGCGAGCTTGTCGCCGGGGA
ATGCATCAAACTCGGCCGTGGCCATGCCGAACGGCTTGTCCCCATGATCGCGGCGCTTCCCGGAAACGGCCGTGCCGAGG
CAATTGCCGTCGATGTCGGACCAGGCAGCTTCACCGGTATCCGCGTTGGCCTTGCCGCCGCGCGCGCATTGGCCATGGCG
TGGGGCGCCCGGATCGAAGGCTACGAAAGCCTCTCGCTTGTTGCCGCGATGGCTGCGTCTGCGCGTCCCGGCCTGCCCAT
CGACGTATGCATGACCGGCGGCCATGGCGAATGGTTCTTCCAGTCGTTCTCGGCCCAACTTGCGCCGCTTTCGCCTCTCG
CCTCGCTGCATCCGGACGAAGCCCGTGGCCGTTGCACCGCCCCTCTCGTCGCGGGAAGCCAGGCACTGGCGCTTGGCGCC
CTGCGACCGGACGCCATCGCGCTCGACATATTGCCCGATGCGCGGCGGTCCGTGCTCCTTGCGCCCGCCGCATTCCATTC
CGACCCACGGCCAAGCTATGGCCGGGCGCCGGACGCAAAGCTTCCCGCCCAGGTCCAATAG

Upstream 100 bases:

>100_bases
TCCTCCACGGCGACGCTCAAGAACGGCATCGAGAGCCTGCTCAAGCACTACGTCCCCGAAGTGAGCGAAGTCCGCGCCGC
CTGAGGCCGGTCCCGATCGC

Downstream 100 bases:

>100_bases
CCAGAACAACGATGATCGCACCCATGGACGACATCGACCGCATCATGTCCGTGATGGACGCCGCGTTTCCTGCCGAGTTC
GGCGAAGCATGGAACAGGCG

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: Protease; Metal-Dependent Protease

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA
WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA
LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ

Sequences:

>Translated_206_residues
MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA
WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA
LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ
>Mature_206_residues
MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA
WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA
LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21249; Mature: 21249

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVG
CCEEEEECCCCCCEEEEEECCCEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC
PGSFTGIRVGLAAARALAMAWGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
QSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGALRPDAIALDILPDARRSVLL
HHHCCCCCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE
APAAFHSDPRPSYGRAPDAKLPAQVQ
EHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVG
CCEEEEECCCCCCEEEEEECCCEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC
PGSFTGIRVGLAAARALAMAWGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
QSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGALRPDAIALDILPDARRSVLL
HHHCCCCCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE
APAAFHSDPRPSYGRAPDAKLPAQVQ
EHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA