| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yeaZ [C]
Identifier: 87199009
GI number: 87199009
Start: 1029346
End: 1029966
Strand: Reverse
Name: yeaZ [C]
Synonym: Saro_0987
Alternate gene names: 87199009
Gene position: 1029966-1029346 (Counterclockwise)
Preceding gene: 87199010
Following gene: 87199008
Centisome position: 28.92
GC content: 67.31
Gene sequence:
>621_bases ATGCGAAGGCTCGTAATCGACAGCGCGACGGAAAACTGCTCGGTCGCCCTGATCGACAACGGCGAGCTTGTCGCCGGGGA ATGCATCAAACTCGGCCGTGGCCATGCCGAACGGCTTGTCCCCATGATCGCGGCGCTTCCCGGAAACGGCCGTGCCGAGG CAATTGCCGTCGATGTCGGACCAGGCAGCTTCACCGGTATCCGCGTTGGCCTTGCCGCCGCGCGCGCATTGGCCATGGCG TGGGGCGCCCGGATCGAAGGCTACGAAAGCCTCTCGCTTGTTGCCGCGATGGCTGCGTCTGCGCGTCCCGGCCTGCCCAT CGACGTATGCATGACCGGCGGCCATGGCGAATGGTTCTTCCAGTCGTTCTCGGCCCAACTTGCGCCGCTTTCGCCTCTCG CCTCGCTGCATCCGGACGAAGCCCGTGGCCGTTGCACCGCCCCTCTCGTCGCGGGAAGCCAGGCACTGGCGCTTGGCGCC CTGCGACCGGACGCCATCGCGCTCGACATATTGCCCGATGCGCGGCGGTCCGTGCTCCTTGCGCCCGCCGCATTCCATTC CGACCCACGGCCAAGCTATGGCCGGGCGCCGGACGCAAAGCTTCCCGCCCAGGTCCAATAG
Upstream 100 bases:
>100_bases TCCTCCACGGCGACGCTCAAGAACGGCATCGAGAGCCTGCTCAAGCACTACGTCCCCGAAGTGAGCGAAGTCCGCGCCGC CTGAGGCCGGTCCCGATCGC
Downstream 100 bases:
>100_bases CCAGAACAACGATGATCGCACCCATGGACGACATCGACCGCATCATGTCCGTGATGGACGCCGCGTTTCCTGCCGAGTTC GGCGAAGCATGGAACAGGCG
Product: peptidase M22, glycoprotease
Products: NA
Alternate protein names: Protease; Metal-Dependent Protease
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ
Sequences:
>Translated_206_residues MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ >Mature_206_residues MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVGPGSFTGIRVGLAAARALAMA WGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFFQSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGA LRPDAIALDILPDARRSVLLAPAAFHSDPRPSYGRAPDAKLPAQVQ
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21249; Mature: 21249
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVG CCEEEEECCCCCCEEEEEECCCEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC PGSFTGIRVGLAAARALAMAWGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFF CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH QSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGALRPDAIALDILPDARRSVLL HHHCCCCCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE APAAFHSDPRPSYGRAPDAKLPAQVQ EHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRLVIDSATENCSVALIDNGELVAGECIKLGRGHAERLVPMIAALPGNGRAEAIAVDVG CCEEEEECCCCCCEEEEEECCCEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEECC PGSFTGIRVGLAAARALAMAWGARIEGYESLSLVAAMAASARPGLPIDVCMTGGHGEWFF CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH QSFSAQLAPLSPLASLHPDEARGRCTAPLVAGSQALALGALRPDAIALDILPDARRSVLL HHHCCCCCCCCCHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCEEEEEECCCCCCEEEE APAAFHSDPRPSYGRAPDAKLPAQVQ EHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA