| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is phoH [H]
Identifier: 87199003
GI number: 87199003
Start: 1024414
End: 1025460
Strand: Reverse
Name: phoH [H]
Synonym: Saro_0981
Alternate gene names: 87199003
Gene position: 1025460-1024414 (Counterclockwise)
Preceding gene: 87199004
Following gene: 87199002
Centisome position: 28.79
GC content: 65.62
Gene sequence:
>1047_bases ATGGCCCGAAAACTCCCCCGCGCCGACGAGGCGCACCATCGCCCGGAGCAGCATCGCCCCGATCTTCACAGGCGCGCCCG CGTTGAAGTCGAATTCGATGAACAGACCGTCCTCGGCGCCCTGTTCGGCCAGTTCGACACCAATCTCGTGCAGATCGAGA ACCGGTTGGGAGTTTACATTTCGGCGCGCGGCAATCGCGTCCTCATCGAAGGTCCGGAAGATTCCGTCGCCCGTGCGCGC GACGTCCTCAAGGGGATGCACCAGCGCCTTCTCTCAGGCCAGGACCTCGATTCCGGCGCGGTCGAATCCCTCATCGCGAT GAGCGTCGAGCCCACCCTAGAAGGGATCATCACCGGCGCGCCCGGCGGTGCCCCGCCTATCATGATCCGCACCCGCAAGA AGACGATCATTCCGCGTTCCCCGACGCAGATCGACTACATGAAGGCGCTGATCTCGAACGACGTGATCTTCGCGCTGGGG CCGGCTGGTACCGGCAAGACCTATCTCGCGGTCGCCCAGGCCGTTGCGCAGCTCATCTCCGGTTCGGTCCAGCGACTGAT CCTGTCCCGTCCGGCGGTCGAGGCCGGAGAGCGGCTGGGCTTCCTGCCCGGCGACATGAAGGAGAAGGTCGATCCCTATC TCCGCCCGCTCTACGACGCGCTCTACGACTGCATGCCGCCCGAACAGGTCGAGCGGCGCATGGCCAGCGGAGAGATCGAG ATCGCGCCGATCGCCTTCATGCGCGGGCGCACGCTGGCAGACGCATTCGTCATTCTCGACGAGGCGCAGAACACCACGCC CGCGCAGATGAAGATGTTCCTCACCCGCTTCGGCCAGAACAGCCGCATGGTCATCTGCGGCGACCCCAAGCAGGTCGACC TTCCCGGCGGTGTCGGGGCAAGCGGGCTCAACGACGCCGTCCAGCGCCTCGAAGGCGTCGAAGGGATCGCAACGGTACGC TTCAGCACGGCAGACGTCGTGCGCCACCCCATCGTCGGCCGGATCGTCGAGGCATACGAAGGCAAGAACGAAGGCCGCGA CGCGTGA
Upstream 100 bases:
>100_bases TTGGTCTGTGGAATAGTCGGCGCGGCGCTTGCGCCGGCAATATCCATACCTATTCTCTTGTCAGGCCCTTGTCCGTAAGG GCCCAACCAGACAGGAGCGC
Downstream 100 bases:
>100_bases GTGCGCCCATCCTCGAAATGGACATCGACCCCGTCTGGGGCGACGCGATCGACTGGGAGGACATTGCCAGCCGCGCCGCG GAAGCCGCCGCCAAGGTCGC
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MARKLPRADEAHHRPEQHRPDLHRRARVEVEFDEQTVLGALFGQFDTNLVQIENRLGVYISARGNRVLIEGPEDSVARAR DVLKGMHQRLLSGQDLDSGAVESLIAMSVEPTLEGIITGAPGGAPPIMIRTRKKTIIPRSPTQIDYMKALISNDVIFALG PAGTGKTYLAVAQAVAQLISGSVQRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDCMPPEQVERRMASGEIE IAPIAFMRGRTLADAFVILDEAQNTTPAQMKMFLTRFGQNSRMVICGDPKQVDLPGGVGASGLNDAVQRLEGVEGIATVR FSTADVVRHPIVGRIVEAYEGKNEGRDA
Sequences:
>Translated_348_residues MARKLPRADEAHHRPEQHRPDLHRRARVEVEFDEQTVLGALFGQFDTNLVQIENRLGVYISARGNRVLIEGPEDSVARAR DVLKGMHQRLLSGQDLDSGAVESLIAMSVEPTLEGIITGAPGGAPPIMIRTRKKTIIPRSPTQIDYMKALISNDVIFALG PAGTGKTYLAVAQAVAQLISGSVQRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDCMPPEQVERRMASGEIE IAPIAFMRGRTLADAFVILDEAQNTTPAQMKMFLTRFGQNSRMVICGDPKQVDLPGGVGASGLNDAVQRLEGVEGIATVR FSTADVVRHPIVGRIVEAYEGKNEGRDA >Mature_347_residues ARKLPRADEAHHRPEQHRPDLHRRARVEVEFDEQTVLGALFGQFDTNLVQIENRLGVYISARGNRVLIEGPEDSVARARD VLKGMHQRLLSGQDLDSGAVESLIAMSVEPTLEGIITGAPGGAPPIMIRTRKKTIIPRSPTQIDYMKALISNDVIFALGP AGTGKTYLAVAQAVAQLISGSVQRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDCMPPEQVERRMASGEIEI APIAFMRGRTLADAFVILDEAQNTTPAQMKMFLTRFGQNSRMVICGDPKQVDLPGGVGASGLNDAVQRLEGVEGIATVRF STADVVRHPIVGRIVEAYEGKNEGRDA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=310, Percent_Identity=48.0645161290323, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1787257, Length=287, Percent_Identity=42.5087108013937, Blast_Score=202, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38012; Mature: 37881
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKLPRADEAHHRPEQHRPDLHRRARVEVEFDEQTVLGALFGQFDTNLVQIENRLGVYI CCCCCCCCCHHHCCCHHCCCCHHHHEEEEEEECHHHHHHHHHHHHCCCCEEEECCCEEEE SARGNRVLIEGPEDSVARARDVLKGMHQRLLSGQDLDSGAVESLIAMSVEPTLEGIITGA EECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEECC PGGAPPIMIRTRKKTIIPRSPTQIDYMKALISNDVIFALGPAGTGKTYLAVAQAVAQLIS CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH GSVQRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDCMPPEQVERRMASGEIE HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCEE IAPIAFMRGRTLADAFVILDEAQNTTPAQMKMFLTRFGQNSRMVICGDPKQVDLPGGVGA EEEEHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCC SGLNDAVQRLEGVEGIATVRFSTADVVRHPIVGRIVEAYEGKNEGRDA CCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARKLPRADEAHHRPEQHRPDLHRRARVEVEFDEQTVLGALFGQFDTNLVQIENRLGVYI CCCCCCCCHHHCCCHHCCCCHHHHEEEEEEECHHHHHHHHHHHHCCCCEEEECCCEEEE SARGNRVLIEGPEDSVARARDVLKGMHQRLLSGQDLDSGAVESLIAMSVEPTLEGIITGA EECCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHEEEECC PGGAPPIMIRTRKKTIIPRSPTQIDYMKALISNDVIFALGPAGTGKTYLAVAQAVAQLIS CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHH GSVQRLILSRPAVEAGERLGFLPGDMKEKVDPYLRPLYDALYDCMPPEQVERRMASGEIE HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHCCCEE IAPIAFMRGRTLADAFVILDEAQNTTPAQMKMFLTRFGQNSRMVICGDPKQVDLPGGVGA EEEEHHHCCCHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCC SGLNDAVQRLEGVEGIATVRFSTADVVRHPIVGRIVEAYEGKNEGRDA CCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]