| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mgtE [H]
Identifier: 87198987
GI number: 87198987
Start: 1011254
End: 1012699
Strand: Reverse
Name: mgtE [H]
Synonym: Saro_0965
Alternate gene names: 87198987
Gene position: 1012699-1011254 (Counterclockwise)
Preceding gene: 87198989
Following gene: 87198986
Centisome position: 28.43
GC content: 65.63
Gene sequence:
>1446_bases ATGGAGCGCGACGAGGACCTCATCGAATCCCTCGCTCCCGACGCGGACGATATCCCCGCGCCGGTCGAACCTTCGCGCCA TTCGGAAAGCCTCGACGAACAGGACAACACCTTGCGCCCGGGCTTTGTGCGCAAGGTCGCCGAAGCGCTCGAGGCAGGCG ACGACGAGACCGTCTACAACCTCGTCGAACCGCTCCATCCGGCCGACATCGCCGACCTCTTCGAACTGATCGACCAGAAC GACCGCGTGGTTCTCGCCCGCGCGATCAACGACCTGATGGGCGGCGAGGTCCTCGCCGAACTGAACGATCACGTCCGCGA ACTGCTCGTCGAAGCGCTCGAGCCCGAGGAAGTCGCCGACCTTGCCGAGCAGATGGAGACGGACGATGCCGTCGCCCTGA TCGAGGATCTCGACGAGGAGGACCAGCAGGCCGTCCTTGCCGAGATGGAGCCGGAAGACCGGGCCGCCATCGAATCGGCG CTGTCCTACCCGGAAGAGACCGCCGGCCGCCTGATGAGCCGCGATCTGATCGCGGTGCCCGAGGCGATGACCGTGGGCAA TCTCATCGACTACCTACGCCGCGACGACGAACTGCCCACCGAGTTCTGGGAAGTGTTCATCGTCGATCACAAGCACCACC CGGTCGGCACCTGCAGCCTCTCATGGATACTGCGCGCGCCGCGCAGCGTGCCGCTGGCCGACGTGATGAAGCGCGACCAG ACGCTGATCCCGGTCACGATGGACCAGGAAGAAGTCGCGCTGCGCTTCCAGAAGTACGCCTTGATCTCGGCCGCCGTGGT CGACGAATCCGGCCGCCTCGTCGGCCAGATTACCGTCGACGATATCGTCCACATCATCCAGGAAGAGGCGAGCGAGGACA TCCTGCGCCTGTCGGGTGCAGGCGATGGCGACATCAACGAGCCGATCCGCCTGACCGTGCAGACGCGCCTTACCTGGCTC GTGGTCAACCTCGGTACGGCGATCGTCGCATCGTCGGTGGTGGGCCTGTTCCAGGGAGCGATCGCAAAGCTCGCCCTGCT TGCCGTGCTCATGCCGATCGTTTCGGGCATGGGGGGCAATGCCGGCACGCAGACGCTCGCTGTGGTCGTGCGCGCCATCG CCACCAACCAGCTAACCAGCTCCAACACCATCCGCATGATCCTGCGCGAGCTGCGCATCGCCGCCGCCAACGGCACCGCG CTCGGCCTGCTGATCGGCTGCGGCACGGCCCTGCTGTTCGGCAATCCGCTGCTCGGCTCGGTGATCGGCGCGGCCATGGT CATCAACAATCTCGTGGCGGGCCTTGCGGGGATCATGGTCCCGGTCACGCTCGACCGCCTCAAGGTAGACCCGGCTGTCT CTTCGGCCGTATTCGTGACCATGGCGACCGATGTCATGGGCTTCTTCTCGTTCCTCGGCCTCGCCGTGCTGAGCGGTCTG GCCTAG
Upstream 100 bases:
>100_bases TCCTTCCTGTTTGACGGGGGATATAAGGGGTTGGACAAGAAAGTCACGCATAGGTCTGCCAGACGGTTGCAATTGGCGTC CCAGTGGCTAACCCGCCCCA
Downstream 100 bases:
>100_bases TTCGGAAGAAGATCATGCCCCTCAACATGACCAAGGTTGCCTACGGCGCCCAGTCGCTCGCCGAAATCCACGAATGGTTC TCGGATTCGGGTCGTCGCGG
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYNLVEPLHPADIADLFELIDQN DRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVADLAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESA LSYPEETAGRLMSRDLIAVPEAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGAGDGDINEPIRLTVQTRLTWL VVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGNAGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTA LGLLIGCGTALLFGNPLLGSVIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL A
Sequences:
>Translated_481_residues MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYNLVEPLHPADIADLFELIDQN DRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVADLAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESA LSYPEETAGRLMSRDLIAVPEAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGAGDGDINEPIRLTVQTRLTWL VVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGNAGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTA LGLLIGCGTALLFGNPLLGSVIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL A >Mature_481_residues MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYNLVEPLHPADIADLFELIDQN DRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVADLAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESA LSYPEETAGRLMSRDLIAVPEAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGAGDGDINEPIRLTVQTRLTWL VVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGNAGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTA LGLLIGCGTALLFGNPLLGSVIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL A
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 51744; Mature: 51744
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYN CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH LVEPLHPADIADLFELIDQNDRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVAD HHCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH LAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESALSYPEETAGRLMSRDLIAVP HHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHCC EAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ CHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCC TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGA EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC GDGDINEPIRLTVQTRLTWLVVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGN CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTALGLLIGCGTALLFGNPLLGS CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH VIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure MERDEDLIESLAPDADDIPAPVEPSRHSESLDEQDNTLRPGFVRKVAEALEAGDDETVYN CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHH LVEPLHPADIADLFELIDQNDRVVLARAINDLMGGEVLAELNDHVRELLVEALEPEEVAD HHCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHH LAEQMETDDAVALIEDLDEEDQQAVLAEMEPEDRAAIESALSYPEETAGRLMSRDLIAVP HHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCHHHHCC EAMTVGNLIDYLRRDDELPTEFWEVFIVDHKHHPVGTCSLSWILRAPRSVPLADVMKRDQ CHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCC TLIPVTMDQEEVALRFQKYALISAAVVDESGRLVGQITVDDIVHIIQEEASEDILRLSGA EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC GDGDINEPIRLTVQTRLTWLVVNLGTAIVASSVVGLFQGAIAKLALLAVLMPIVSGMGGN CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGTQTLAVVVRAIATNQLTSSNTIRMILRELRIAAANGTALGLLIGCGTALLFGNPLLGS CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHH VIGAAMVINNLVAGLAGIMVPVTLDRLKVDPAVSSAVFVTMATDVMGFFSFLGLAVLSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]