| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198971
Identifier: 87198971
GI number: 87198971
Start: 995490
End: 996863
Strand: Reverse
Name: 87198971
Synonym: Saro_0949
Alternate gene names: NA
Gene position: 996863-995490 (Counterclockwise)
Preceding gene: 229324846
Following gene: 87198970
Centisome position: 27.99
GC content: 66.38
Gene sequence:
>1374_bases ATGAGCACGCGGCAAGTTTCAGATCGCAACGATCCCCTGATCGAGAGCCGCGACATGCTCGTCGCGCCGATGCAGAAGGG CGAGAAGCCGGCGTCGGCCTGGCGCATCGGCACCGAGCACGAAAAGTTCGTCTACCGTACCGACGACAGGCGCGCGCCTT CCTACACGGAAGCCGGCGGCATCCGCGACCTGCTGATGGCGCTGACCGAATACGGCTGGTCGCCGATCATGGAAGGCGAC AACGTCATCGCGATGAGCGGTCCGGACGGGGCGGTCAGCCTTGAACCGGCAGGCCAGCTGGAGCTTTCGGGTGCCCCGCT GGAGAACCTGCATCAGACCTGCGCCGAGACCGGGCGTCACCTCGCGCAAGTGAAGACCATCGGCGACCGGCTCGGCCTCG GCTATCTCGGACTGGGGCTCTGGCCCGACAAGACGCGCGAAGAACTGCCGATCATGCCCAAGGGCCGTTACGAGATCATG CTGCGGCACATGCCGCGCGTGGGTTCGATGGGCCTCGACATGATGCTTCGGACCTGCACGATCCAGACCAACCTCGACTA TTCGAGCGAGGCGGACATGGTGCAGAAGTTCCGCGTATCGCTGGCGCTCCAGCCGCTGGCGACCGCGCTGTTCGCCAATT CGCCGTTCCTCGAAGGCAAGCCCAACGGCTTCCTGTCCTATCGCAGCCACATCTGGACCGACACCGACCCGGCGCGCACC GGCATGCTCTCGTTCGTGTTCGACGAGGGTTTCGGTTACGAGCGCTATGTCGACTACATGCTCGACGTGCCGATGTACTT CGTATTCCGCGACGGCCACTACATCGACGCCTCGGGCCAGTCGTTCCGCGACTTCCTGAAGGGTGAACTCCCCGCGCTGC CCGGCGAGAAGCCGCGCCAGTCGGACTGGGTGGACCACCTTTCCACCGCGTTCCCCGAAGTGCGGCTCAAGTCGTTCCTC GAGATGCGCGGGGCGGACGGCGGGCCGTGGAACCGCATCTGCGCGCTGCCGGCGCTGTGGGTCGGCCTGCTCTATGACCA GGGCGCGCTCGATGCGGCGTGGGATCTGGTCAAGGACTGGGACATGGACGGGCGCGAAAGGCTGCGGGCGGAAGTGCCCC GGCTCGGGCTCGATGCTGCCCTGCCCGGCGGCGGCACCCTGCGCGACATCGCGGCCGAGGTGCTGGCAATCTCGCGCAGC GGGCTTTCGGCGCGCAACCGGCTCAACGAAGCGGGCGACAACGAGACCGGCTATCTCCAGCCGCTCGACGAGATCGTGGC GACCGGCAAGACGCCGGCCGAGCGGTTGCTGGATCTCTACAACGGCCCGTGGGGCGGGGATCTTTCGCAGATCTACGCGG AAAAGAGCTTCTGA
Upstream 100 bases:
>100_bases GTTCGGCTGATTTCACCTATTGCGGGAACAGTGAGTTGCAACGCGCCGGGCAAACAATTTGACTGGCCTAAACCGCATCG CCGCATTAACGGAAACCGCC
Downstream 100 bases:
>100_bases TCCCGTCGCGCAGAAAGGTGCGCTTCGGTCCTTTCGATTTGATCGCATGGCGGCCTGCTGGCATCACCCGAATGCCACAG CAGGAGAAGCATGCGTGATC
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: Glutamate/Cysteine Ligase; Gamma-Glutamylcysteine Synthetase; Glutamate/Cysteine Ligase Family Protein; Glutamate-Cysteine Ligase GshA; Glutamylcysteine Synthetase; Glutamate-Cysteine Ligase Family 2 Protein; Glutamate-Cysteine Ligase Protein; Glutathione Synthetase; Glutamate-Cysteine Ligase Gsha; Glutamate-Cysteine Ligase Protein; Glutamate-Cysteine Ligase Family Protein; Glutamate Cystein Ligase Protein; Glutamate-Cysteine Ligase GSHA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSTRQVSDRNDPLIESRDMLVAPMQKGEKPASAWRIGTEHEKFVYRTDDRRAPSYTEAGGIRDLLMALTEYGWSPIMEGD NVIAMSGPDGAVSLEPAGQLELSGAPLENLHQTCAETGRHLAQVKTIGDRLGLGYLGLGLWPDKTREELPIMPKGRYEIM LRHMPRVGSMGLDMMLRTCTIQTNLDYSSEADMVQKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPART GMLSFVFDEGFGYERYVDYMLDVPMYFVFRDGHYIDASGQSFRDFLKGELPALPGEKPRQSDWVDHLSTAFPEVRLKSFL EMRGADGGPWNRICALPALWVGLLYDQGALDAAWDLVKDWDMDGRERLRAEVPRLGLDAALPGGGTLRDIAAEVLAISRS GLSARNRLNEAGDNETGYLQPLDEIVATGKTPAERLLDLYNGPWGGDLSQIYAEKSF
Sequences:
>Translated_457_residues MSTRQVSDRNDPLIESRDMLVAPMQKGEKPASAWRIGTEHEKFVYRTDDRRAPSYTEAGGIRDLLMALTEYGWSPIMEGD NVIAMSGPDGAVSLEPAGQLELSGAPLENLHQTCAETGRHLAQVKTIGDRLGLGYLGLGLWPDKTREELPIMPKGRYEIM LRHMPRVGSMGLDMMLRTCTIQTNLDYSSEADMVQKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPART GMLSFVFDEGFGYERYVDYMLDVPMYFVFRDGHYIDASGQSFRDFLKGELPALPGEKPRQSDWVDHLSTAFPEVRLKSFL EMRGADGGPWNRICALPALWVGLLYDQGALDAAWDLVKDWDMDGRERLRAEVPRLGLDAALPGGGTLRDIAAEVLAISRS GLSARNRLNEAGDNETGYLQPLDEIVATGKTPAERLLDLYNGPWGGDLSQIYAEKSF >Mature_456_residues STRQVSDRNDPLIESRDMLVAPMQKGEKPASAWRIGTEHEKFVYRTDDRRAPSYTEAGGIRDLLMALTEYGWSPIMEGDN VIAMSGPDGAVSLEPAGQLELSGAPLENLHQTCAETGRHLAQVKTIGDRLGLGYLGLGLWPDKTREELPIMPKGRYEIML RHMPRVGSMGLDMMLRTCTIQTNLDYSSEADMVQKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPARTG MLSFVFDEGFGYERYVDYMLDVPMYFVFRDGHYIDASGQSFRDFLKGELPALPGEKPRQSDWVDHLSTAFPEVRLKSFLE MRGADGGPWNRICALPALWVGLLYDQGALDAAWDLVKDWDMDGRERLRAEVPRLGLDAALPGGGTLRDIAAEVLAISRSG LSARNRLNEAGDNETGYLQPLDEIVATGKTPAERLLDLYNGPWGGDLSQIYAEKSF
Specific function: Unknown
COG id: COG3572
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50851; Mature: 50720
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRQVSDRNDPLIESRDMLVAPMQKGEKPASAWRIGTEHEKFVYRTDDRRAPSYTEAGG CCCCCCCCCCCCCCCCCCCEEECHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCC IRDLLMALTEYGWSPIMEGDNVIAMSGPDGAVSLEPAGQLELSGAPLENLHQTCAETGRH HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHH LAQVKTIGDRLGLGYLGLGLWPDKTREELPIMPKGRYEIMLRHMPRVGSMGLDMMLRTCT HHHHHHHHHHHCCHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE IQTNLDYSSEADMVQKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPART EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHH GMLSFVFDEGFGYERYVDYMLDVPMYFVFRDGHYIDASGQSFRDFLKGELPALPGEKPRQ HHHHEEECCCCCHHHHHHHHHCCCEEEEEECCEEECCCCHHHHHHHCCCCCCCCCCCCCH SDWVDHLSTAFPEVRLKSFLEMRGADGGPWNRICALPALWVGLLYDQGALDAAWDLVKDW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC DMDGRERLRAEVPRLGLDAALPGGGTLRDIAAEVLAISRSGLSARNRLNEAGDNETGYLQ CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC PLDEIVATGKTPAERLLDLYNGPWGGDLSQIYAEKSF CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCC >Mature Secondary Structure STRQVSDRNDPLIESRDMLVAPMQKGEKPASAWRIGTEHEKFVYRTDDRRAPSYTEAGG CCCCCCCCCCCCCCCCCCEEECHHCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCC IRDLLMALTEYGWSPIMEGDNVIAMSGPDGAVSLEPAGQLELSGAPLENLHQTCAETGRH HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHH LAQVKTIGDRLGLGYLGLGLWPDKTREELPIMPKGRYEIMLRHMPRVGSMGLDMMLRTCT HHHHHHHHHHHCCHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHE IQTNLDYSSEADMVQKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPART EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHH GMLSFVFDEGFGYERYVDYMLDVPMYFVFRDGHYIDASGQSFRDFLKGELPALPGEKPRQ HHHHEEECCCCCHHHHHHHHHCCCEEEEEECCEEECCCCHHHHHHHCCCCCCCCCCCCCH SDWVDHLSTAFPEVRLKSFLEMRGADGGPWNRICALPALWVGLLYDQGALDAAWDLVKDW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC DMDGRERLRAEVPRLGLDAALPGGGTLRDIAAEVLAISRSGLSARNRLNEAGDNETGYLQ CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCC PLDEIVATGKTPAERLLDLYNGPWGGDLSQIYAEKSF CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA