| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87198970
Identifier: 87198970
GI number: 87198970
Start: 995096
End: 995443
Strand: Reverse
Name: 87198970
Synonym: Saro_0948
Alternate gene names: NA
Gene position: 995443-995096 (Counterclockwise)
Preceding gene: 87198971
Following gene: 87198962
Centisome position: 27.95
GC content: 63.22
Gene sequence:
>348_bases ATGGCGGCCTGCTGGCATCACCCGAATGCCACAGCAGGAGAAGCATGCGTGATCATCGTGATGGGCAGTTTCCGCCTTCC GATCGAGAATTTCGATTCGGCGCTGCCGATGATGGAAAAGGTCATCGCCGCGACCCGTGCAGAGGACGGCTGCCTGCTCT ATGCCTATTCGCGCGACACGATCGACCCGGGGCTCGTCCGGGTGAGCGAACAATGGCGCGACCGCGCGGCGCTCGACGCA CATTTCCGCACGCAGCACATGAAAGTCTGGGCCGAGGAACGTGCGGCGCTGGGCCTGACCGAACGCGACATCCGCGTATT CGAGGCGGACGAAGGGGTAGCGGTCTAA
Upstream 100 bases:
>100_bases AACGGCCCGTGGGGCGGGGATCTTTCGCAGATCTACGCGGAAAAGAGCTTCTGATCCCGTCGCGCAGAAAGGTGCGCTTC GGTCCTTTCGATTTGATCGC
Downstream 100 bases:
>100_bases CCCGGACTGTCGGGCGGAAGAGTAGGCAGGGCGCCCTGAGCCAGCTTATCGATGACCACCGGAGCGGATGCGCCAAGGTA AAAGGCCACCAGCCCGGTCT
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAACWHHPNATAGEACVIIVMGSFRLPIENFDSALPMMEKVIAATRAEDGCLLYAYSRDTIDPGLVRVSEQWRDRAALDA HFRTQHMKVWAEERAALGLTERDIRVFEADEGVAV
Sequences:
>Translated_115_residues MAACWHHPNATAGEACVIIVMGSFRLPIENFDSALPMMEKVIAATRAEDGCLLYAYSRDTIDPGLVRVSEQWRDRAALDA HFRTQHMKVWAEERAALGLTERDIRVFEADEGVAV >Mature_114_residues AACWHHPNATAGEACVIIVMGSFRLPIENFDSALPMMEKVIAATRAEDGCLLYAYSRDTIDPGLVRVSEQWRDRAALDAH FRTQHMKVWAEERAALGLTERDIRVFEADEGVAV
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12861; Mature: 12730
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAACWHHPNATAGEACVIIVMGSFRLPIENFDSALPMMEKVIAATRAEDGCLLYAYSRDT CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC IDPGLVRVSEQWRDRAALDAHFRTQHMKVWAEERAALGLTERDIRVFEADEGVAV CCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure AACWHHPNATAGEACVIIVMGSFRLPIENFDSALPMMEKVIAATRAEDGCLLYAYSRDT CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC IDPGLVRVSEQWRDRAALDAHFRTQHMKVWAEERAALGLTERDIRVFEADEGVAV CCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA