Click here to switch to the map view.

The map label for this gene is 87198893

Identifier: 87198893

GI number: 87198893

Start: 926038

End: 926886

Strand: Reverse

Name: 87198893

Synonym: Saro_0871

Alternate gene names: NA

Gene position: 926886-926038 (Counterclockwise)

Preceding gene: 87198894

Following gene: 87198892

Centisome position: 26.02

GC content: 67.61

Gene sequence:

>849_bases
ATGCAGATGCATGACGCAGGGGACGGCGGAATGAGCCAGTCCGCAACGGTCCAGGCCATCGGACGGCTTGCCGCCGACAT
GCAGAGCGATGGGCAGGGCGATGGGCAGAGCGACGGGCAACGCTTCGTCCTGCGCGGGGTCGATGGCTGGTTGCAGGGCC
GCACGATGTACGGCGGCGCATCATCGTTTCTCGCATATGCGGCGGCGCGCAAGGCACGGCCGGACCTGCCCCCGCTGCGC
GGCGCGCAGGTCGGTTTCATCGCGCCGGTCGGACAGGACATGGACATTGCCGTCAGCGTGCTGCGCGAAGGCAAGAGCGT
AAGCCAGATCCAGACCAATCTCTATTGCGACGGCGCGCTTGCGCATCGCGGACTCTGGCTGTTCGGCAGCGCCCGCCAAT
CGAACGGGGGCGTTGCGCCGGGAACGGCCGAGGGCTTCCTGCCGGTCGAGGAGATGGAACCCATCGGATCGCCCGAGGGC
CTGCATTTCGTTCGCAATCTCGAGATCCGCAGGGCCGAGCCAAGGGGCGGCCTCAGGCAGGGCACGGTCCGCCGCTGGGT
ACGGCTGAAGGACCGCGACGGGCTGGACCCGATCGGCGAACTGGTGTTGCTGGGGGATGCGCTTCCCCCCGGATCGATCC
GCGCGATGGAGCGGCAGGGACCGATCAGCTCGATCAACTGGTCGCTGACCCTGCTGGGCGACGCGCCGACGACGCGGGAT
GGATGGTGGCTGCTCGAAACCGCATCGAACCACATGGCCGACGGTTTCAGCAGCGAGACGCTGCGGATGTGGAACGCCGA
TGGCGTGGAAGTGATGCGCGGGCTCCAGAGCGTCGCGATCTTTGGCTGA

Upstream 100 bases:

>100_bases
CCGGGCAGCTCTTTCCCTTTACGTAAAGGTGCACTACCACCTTGCCTTCAAGAGTCGCGCCGGAACACGCGAAACCTTGG
GAGAGAGCGGTGAACGCACG

Downstream 100 bases:

>100_bases
CGGAGAGATAGAGATGGACCTTGCCGACCCGCAGACGCTCGGTTTCGATGCGTCCCGGCTGGAGCGCATCGCCGCATTCC
TGGACGAGCAGTATGTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: TesB Family Acyl-CoA Thioesterase; TesB-Like Acyl-CoA Thioesterase; Acyl-CoA Thioesterase; Thioesterase Superfamily Protein; Acyl-CoA Thioesterase-Like Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MQMHDAGDGGMSQSATVQAIGRLAADMQSDGQGDGQSDGQRFVLRGVDGWLQGRTMYGGASSFLAYAAARKARPDLPPLR
GAQVGFIAPVGQDMDIAVSVLREGKSVSQIQTNLYCDGALAHRGLWLFGSARQSNGGVAPGTAEGFLPVEEMEPIGSPEG
LHFVRNLEIRRAEPRGGLRQGTVRRWVRLKDRDGLDPIGELVLLGDALPPGSIRAMERQGPISSINWSLTLLGDAPTTRD
GWWLLETASNHMADGFSSETLRMWNADGVEVMRGLQSVAIFG

Sequences:

>Translated_282_residues
MQMHDAGDGGMSQSATVQAIGRLAADMQSDGQGDGQSDGQRFVLRGVDGWLQGRTMYGGASSFLAYAAARKARPDLPPLR
GAQVGFIAPVGQDMDIAVSVLREGKSVSQIQTNLYCDGALAHRGLWLFGSARQSNGGVAPGTAEGFLPVEEMEPIGSPEG
LHFVRNLEIRRAEPRGGLRQGTVRRWVRLKDRDGLDPIGELVLLGDALPPGSIRAMERQGPISSINWSLTLLGDAPTTRD
GWWLLETASNHMADGFSSETLRMWNADGVEVMRGLQSVAIFG
>Mature_282_residues
MQMHDAGDGGMSQSATVQAIGRLAADMQSDGQGDGQSDGQRFVLRGVDGWLQGRTMYGGASSFLAYAAARKARPDLPPLR
GAQVGFIAPVGQDMDIAVSVLREGKSVSQIQTNLYCDGALAHRGLWLFGSARQSNGGVAPGTAEGFLPVEEMEPIGSPEG
LHFVRNLEIRRAEPRGGLRQGTVRRWVRLKDRDGLDPIGELVLLGDALPPGSIRAMERQGPISSINWSLTLLGDAPTTRD
GWWLLETASNHMADGFSSETLRMWNADGVEVMRGLQSVAIFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30229; Mature: 30229

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMHDAGDGGMSQSATVQAIGRLAADMQSDGQGDGQSDGQRFVLRGVDGWLQGRTMYGGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHCCCEEECCH
SSFLAYAAARKARPDLPPLRGAQVGFIAPVGQDMDIAVSVLREGKSVSQIQTNLYCDGAL
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHEEECCHH
AHRGLWLFGSARQSNGGVAPGTAEGFLPVEEMEPIGSPEGLHFVRNLEIRRAEPRGGLRQ
HHCCEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHHHHCCEEEECCCCCCCHH
GTVRRWVRLKDRDGLDPIGELVLLGDALPPGSIRAMERQGPISSINWSLTLLGDAPTTRD
HHHHHHHEECCCCCCCHHHHEEEEECCCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCC
GWWLLETASNHMADGFSSETLRMWNADGVEVMRGLQSVAIFG
CEEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQMHDAGDGGMSQSATVQAIGRLAADMQSDGQGDGQSDGQRFVLRGVDGWLQGRTMYGGA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHCCCEEECCH
SSFLAYAAARKARPDLPPLRGAQVGFIAPVGQDMDIAVSVLREGKSVSQIQTNLYCDGAL
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHEEECCHH
AHRGLWLFGSARQSNGGVAPGTAEGFLPVEEMEPIGSPEGLHFVRNLEIRRAEPRGGLRQ
HHCCEEEEECCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCHHHHHCCEEEECCCCCCCHH
GTVRRWVRLKDRDGLDPIGELVLLGDALPPGSIRAMERQGPISSINWSLTLLGDAPTTRD
HHHHHHHEECCCCCCCHHHHEEEEECCCCCCCEEHHHHCCCCCCCCEEEEEEECCCCCCC
GWWLLETASNHMADGFSSETLRMWNADGVEVMRGLQSVAIFG
CEEEEEECCCHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA