Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198887

Identifier: 87198887

GI number: 87198887

Start: 917069

End: 917890

Strand: Reverse

Name: 87198887

Synonym: Saro_0865

Alternate gene names: NA

Gene position: 917890-917069 (Counterclockwise)

Preceding gene: 87198889

Following gene: 87198886

Centisome position: 25.77

GC content: 62.9

Gene sequence:

>822_bases
ATGCATGCGGCGGGTTTCACTGGGCATTCCAAGTGCTTCGCCGTGCTTGCCGGTGGACCGCCGCCTGATACAAATCGACG
CATGACCCAGCAGAACGATAGCCGCCCCTGGCCCCAGGCCGGACGCGAACGCCTGATCTACCCCTCCCCGGTGGGCTGGA
AGGGCACCGACTTCGTCGACAACGAAGAGGAACTGCTGCGGCGCCTGAATCCGAAGACCGTGTTCATGATGGGCGACAAC
CCCGCCCTTCCCCGAATGCCCGAACGCCCGCGCCTGCTGGACTTCTTCCGGTGCAGGTTCGGCGACATCACCGTCCGCCA
CCTGCTCGTCAGCGCAAAGCGCGCGCTTGACGACGGATTGCCGGAAAAAGTCGTGATCGCCTGTCTGCTCCACGACATTT
CGAACGGATGCCTGATCCGCGCGGACCACGGATACTGGAGCGCGCAACTAATCGCGCCCTATGTCGATCCGGAAGTGGCC
TTTGCGGTGAAATATCACCAGGCACTGCGCTATGTGCCCGACGAAAGCGTCGGCTATGCCTATCCCGACAGCTATCACAA
GTTCTTCGGGCCGGACTACCAGCCGCCGGAATACCTGCTGCGCGACGCCGAGCATGCACGCGGCCACGAGTGGTACATGA
CCACGCGCCAGGTGACGCTCTACGACACCTATTTCTTCGACGACTTCCCCGAAGTGGACCCGGAAGCCCTGGCCGACGTC
ATCGGCCGCAATTTTCGCGAGCCCGACGAGGGCCTCGGCTTCGACGGCAGCGCGACCGCGCACATGTGGCGCACGATGAT
CTGGCCCAACAATTTCCTTTAG

Upstream 100 bases:

>100_bases
GGATTCGGGTCCGTTGTGGACCTTTCACAGGAGCAGTAATCAAAAATGATCGATTGTGAAAGACATAATATGATTGATTT
TGATTATTCCATCCCGGACC

Downstream 100 bases:

>100_bases
CCGCGTTCATCCATTTATAACGCACGTTAGGCTTGTGCGCTGCGCAAGCCCCCGCTTTAGCTGGAAAAAAGCTGAACCGG
AGAGAATGTCCCGTGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHAAGFTGHSKCFAVLAGGPPPDTNRRMTQQNDSRPWPQAGRERLIYPSPVGWKGTDFVDNEEELLRRLNPKTVFMMGDN
PALPRMPERPRLLDFFRCRFGDITVRHLLVSAKRALDDGLPEKVVIACLLHDISNGCLIRADHGYWSAQLIAPYVDPEVA
FAVKYHQALRYVPDESVGYAYPDSYHKFFGPDYQPPEYLLRDAEHARGHEWYMTTRQVTLYDTYFFDDFPEVDPEALADV
IGRNFREPDEGLGFDGSATAHMWRTMIWPNNFL

Sequences:

>Translated_273_residues
MHAAGFTGHSKCFAVLAGGPPPDTNRRMTQQNDSRPWPQAGRERLIYPSPVGWKGTDFVDNEEELLRRLNPKTVFMMGDN
PALPRMPERPRLLDFFRCRFGDITVRHLLVSAKRALDDGLPEKVVIACLLHDISNGCLIRADHGYWSAQLIAPYVDPEVA
FAVKYHQALRYVPDESVGYAYPDSYHKFFGPDYQPPEYLLRDAEHARGHEWYMTTRQVTLYDTYFFDDFPEVDPEALADV
IGRNFREPDEGLGFDGSATAHMWRTMIWPNNFL
>Mature_273_residues
MHAAGFTGHSKCFAVLAGGPPPDTNRRMTQQNDSRPWPQAGRERLIYPSPVGWKGTDFVDNEEELLRRLNPKTVFMMGDN
PALPRMPERPRLLDFFRCRFGDITVRHLLVSAKRALDDGLPEKVVIACLLHDISNGCLIRADHGYWSAQLIAPYVDPEVA
FAVKYHQALRYVPDESVGYAYPDSYHKFFGPDYQPPEYLLRDAEHARGHEWYMTTRQVTLYDTYFFDDFPEVDPEALADV
IGRNFREPDEGLGFDGSATAHMWRTMIWPNNFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31356; Mature: 31356

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAAGFTGHSKCFAVLAGGPPPDTNRRMTQQNDSRPWPQAGRERLIYPSPVGWKGTDFVD
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCCCCCCCCCC
NEEELLRRLNPKTVFMMGDNPALPRMPERPRLLDFFRCRFGDITVRHLLVSAKRALDDGL
CHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PEKVVIACLLHDISNGCLIRADHGYWSAQLIAPYVDPEVAFAVKYHQALRYVPDESVGYA
CHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
YPDSYHKFFGPDYQPPEYLLRDAEHARGHEWYMTTRQVTLYDTYFFDDFPEVDPEALADV
CCCCHHHHCCCCCCCHHHHHHCHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHHH
IGRNFREPDEGLGFDGSATAHMWRTMIWPNNFL
HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHAAGFTGHSKCFAVLAGGPPPDTNRRMTQQNDSRPWPQAGRERLIYPSPVGWKGTDFVD
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCEECCCCCCCCCCCCCC
NEEELLRRLNPKTVFMMGDNPALPRMPERPRLLDFFRCRFGDITVRHLLVSAKRALDDGL
CHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PEKVVIACLLHDISNGCLIRADHGYWSAQLIAPYVDPEVAFAVKYHQALRYVPDESVGYA
CHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
YPDSYHKFFGPDYQPPEYLLRDAEHARGHEWYMTTRQVTLYDTYFFDDFPEVDPEALADV
CCCCHHHHCCCCCCCHHHHHHCHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHHH
IGRNFREPDEGLGFDGSATAHMWRTMIWPNNFL
HHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA