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The map label for this gene is ygeR [H]

Identifier: 87198871

GI number: 87198871

Start: 899983

End: 900738

Strand: Reverse

Name: ygeR [H]

Synonym: Saro_0849

Alternate gene names: 87198871

Gene position: 900738-899983 (Counterclockwise)

Preceding gene: 87198872

Following gene: 87198870

Centisome position: 25.29

GC content: 68.92

Gene sequence:

>756_bases
ATGAAGCGGCTCGCCGCCGCACTGCTTTTCGTGGCGGCGCCGCTTGCCGCACAGCAAGGCGCGCGCGGGCCGATCGTTGC
CTGGACCTATACGGTTCAGGCGGGCGACACCTTCTCGGGCATCGCCCGCCGCTGGGGCGTGGACATGGCGGCGCTTGGCG
AAGCGAACGGTATTCCCAGCCCCTACGTCATCCGCATAGGCCAGGTCCTCAGGCGGCCGGAACTCAAGGGCTCGACTTCG
AAGCCCCGCCCCGCCCCCTCGCCCTCACCCAGCGCCACGCAAACGCCGACGCCCAAGGCCGTTCCCAGGCCCGCGCCATC
GCCGCGACCGGCGCCTTCGCCGCGACCGCCGCTGCCCTTGCGCGAATCCGATGCCCCGCGCCTGCAGTGGCCTACCGAAG
GGGCGGTGGTCACGCACTTCGGGGAAAGGGTCGCCGGCATTCCCTCGAACGGGATCGACCTGGCCGCGCTCTATGGAACC
AAGGTGCGCGCAGCCGCTGCCGGTACGGTCATCTATGCCGGCAAGGAGCCGGAGCGCTTCGGCCAGCTCATCATCATCGA
CCATGGCGGCGGTTTCGTCACGGCCTATGCCTACCTCGGCTCGATGACCGTCAAGGAAGGCCAGATCGTGACGGCGCGCG
AACGCATCGCGCTTGTCGGCAAGAGCGGCGAGGCGACCCGGCCGACAGTCCATTTCGAACTGCGGCGCAACAACGTACCC
CGCAATCCCGAACTCTACCTTCCGCCGAGGCTGTGA

Upstream 100 bases:

>100_bases
CGGTGCTGGAGAACTACCAGCAGGAGGACGGCAGCGTGGCCGTTCCCGAAGTACTGCTCCCCTACATGGGCGGCCTCGCC
CGCCTGACGCCGCAGGGCTG

Downstream 100 bases:

>100_bases
TGCGGCTCGACCTGCACATGCTGAGGCAGGTGGGGCGCAAGCCGGTGACAGTGCTGCGACGCGCCCTGAAGGTGCCTGTC
TGGGCGGACCTCGGCATGAG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKRLAAALLFVAAPLAAQQGARGPIVAWTYTVQAGDTFSGIARRWGVDMAALGEANGIPSPYVIRIGQVLRRPELKGSTS
KPRPAPSPSPSATQTPTPKAVPRPAPSPRPAPSPRPPLPLRESDAPRLQWPTEGAVVTHFGERVAGIPSNGIDLAALYGT
KVRAAAAGTVIYAGKEPERFGQLIIIDHGGGFVTAYAYLGSMTVKEGQIVTARERIALVGKSGEATRPTVHFELRRNNVP
RNPELYLPPRL

Sequences:

>Translated_251_residues
MKRLAAALLFVAAPLAAQQGARGPIVAWTYTVQAGDTFSGIARRWGVDMAALGEANGIPSPYVIRIGQVLRRPELKGSTS
KPRPAPSPSPSATQTPTPKAVPRPAPSPRPAPSPRPPLPLRESDAPRLQWPTEGAVVTHFGERVAGIPSNGIDLAALYGT
KVRAAAAGTVIYAGKEPERFGQLIIIDHGGGFVTAYAYLGSMTVKEGQIVTARERIALVGKSGEATRPTVHFELRRNNVP
RNPELYLPPRL
>Mature_251_residues
MKRLAAALLFVAAPLAAQQGARGPIVAWTYTVQAGDTFSGIARRWGVDMAALGEANGIPSPYVIRIGQVLRRPELKGSTS
KPRPAPSPSPSATQTPTPKAVPRPAPSPRPAPSPRPPLPLRESDAPRLQWPTEGAVVTHFGERVAGIPSNGIDLAALYGT
KVRAAAAGTVIYAGKEPERFGQLIIIDHGGGFVTAYAYLGSMTVKEGQIVTARERIALVGKSGEATRPTVHFELRRNNVP
RNPELYLPPRL

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=248, Percent_Identity=35.0806451612903, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789099, Length=272, Percent_Identity=29.7794117647059, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082297, Length=126, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 26697; Mature: 26697

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLAAALLFVAAPLAAQQGARGPIVAWTYTVQAGDTFSGIARRWGVDMAALGEANGIPS
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCC
PYVIRIGQVLRRPELKGSTSKPRPAPSPSPSATQTPTPKAVPRPAPSPRPAPSPRPPLPL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RESDAPRLQWPTEGAVVTHFGERVAGIPSNGIDLAALYGTKVRAAAAGTVIYAGKEPERF
CCCCCCCEECCCCCCEEEECCHHHCCCCCCCCEEEEEECCEEEEEECCEEEEECCCHHHC
GQLIIIDHGGGFVTAYAYLGSMTVKEGQIVTARERIALVGKSGEATRPTVHFELRRNNVP
CCEEEEECCCCEEEEEEHHCCEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCC
RNPELYLPPRL
CCCCEEECCCC
>Mature Secondary Structure
MKRLAAALLFVAAPLAAQQGARGPIVAWTYTVQAGDTFSGIARRWGVDMAALGEANGIPS
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCEECCCCCCCCC
PYVIRIGQVLRRPELKGSTSKPRPAPSPSPSATQTPTPKAVPRPAPSPRPAPSPRPPLPL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RESDAPRLQWPTEGAVVTHFGERVAGIPSNGIDLAALYGTKVRAAAAGTVIYAGKEPERF
CCCCCCCEECCCCCCEEEECCHHHCCCCCCCCEEEEEECCEEEEEECCEEEEECCCHHHC
GQLIIIDHGGGFVTAYAYLGSMTVKEGQIVTARERIALVGKSGEATRPTVHFELRRNNVP
CCEEEEECCCCEEEEEEHHCCEEECCCEEEEEEEEEEEEECCCCCCCCEEEEEEECCCCC
RNPELYLPPRL
CCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]