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The map label for this gene is kch [C]

Identifier: 87198870

GI number: 87198870

Start: 898940

End: 899983

Strand: Reverse

Name: kch [C]

Synonym: Saro_0848

Alternate gene names: 87198870

Gene position: 899983-898940 (Counterclockwise)

Preceding gene: 87198871

Following gene: 87198868

Centisome position: 25.27

GC content: 66.28

Gene sequence:

>1044_bases
ATGCGGCTCGACCTGCACATGCTGAGGCAGGTGGGGCGCAAGCCGGTGACAGTGCTGCGACGCGCCCTGAAGGTGCCTGT
CTGGGCGGACCTCGGCATGAGGCTGGGCGCTGCTCTTGCACTGGTCATGCTGGTCGTCATGGTCCACTGGTTCGACCGCG
CAGGGTTGAAGGACAGCCACGACGGGACTGTAAGCTTCCTCGACGTCGTCTATTTCACGATGATCTCGATCACCACGACC
GGCTTTGGGGACATCGCCCCGGTCAGCGACCGTTCGCGGCTGATCGAAGCGGTGATCGTCACGCCGATTCGCGTGCTCGT
GCTCTTCATATTCGTAGGCACGGCCTACAACTTCATCATCAAGCGCAGCTGGGAAAGGTGGCGCATGGCGCAGATCCAGA
AGAACCTGACCGACCACATCGTGGTGCTGGGCTTCGGCATTTCGGGCGCGGAAGCCGTGGCAGAACTGGTCGCGCGGGGC
ACCGATCCGGGCCGGATCGTGGTGATCGACCCGGACGAGACGCGCCTCGCCGTCGCGGCGGAACTGGGCTGCAACGTCAT
GGCCGCCGACGCGACCCGCGATGCGACGCTGATGGACGTGCACATCGCCAGCGCCTGCGCCGTGCTGATCTCGGCAGGGC
GCGATGACACCTCGATCCTCATCACCCTGACCGCCCGCCATCTTGCACCCGGCGTGCCGATAAGCACGGTCGTGCGCGCG
GTGGACAACGAGGCCCTTGCCCGGCAGGCCGGCGCATCGACCGTCATCAATCCCGTGCGCTTCACCGGACTGCTCCTGGC
CGGATCGTCGCAGGGCACCCACGTCGCCGACTACCTCACCGATCTCGCCTCGATCGAGGGCCGCGTGCAACTGGTCGAAC
GGACCGTGTCGCCGGAGGAAGTAGGCAAACCCCTGGCGACCCTCGCCAGCGGAGGGCGGGGATTGCGCATCCATCGCGGC
GACAGGATCGTCGGCTTCTGGGAAGACGCCGCGCAAGCTCTGGAGCCCGGCGACGTCATCGTCGAGATCGTGCCTACGCG
CTAG

Upstream 100 bases:

>100_bases
TCGGCAAGAGCGGCGAGGCGACCCGGCCGACAGTCCATTTCGAACTGCGGCGCAACAACGTACCCCGCAATCCCGAACTC
TACCTTCCGCCGAGGCTGTG

Downstream 100 bases:

>100_bases
CCGAGCAGGAAGAAGGCCAGGCCCATCGCAAGATAGGCGAAGATCCAGAAGCCTCCATCGATCAGCGCCAGCCGCGTGCT
GATCCGCTGGTGGGTATAGC

Product: TrkA-N

Products: K (I) [Cytoplasm] [C]

Alternate protein names: MjK2 [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRLDLHMLRQVGRKPVTVLRRALKVPVWADLGMRLGAALALVMLVVMVHWFDRAGLKDSHDGTVSFLDVVYFTMISITTT
GFGDIAPVSDRSRLIEAVIVTPIRVLVLFIFVGTAYNFIIKRSWERWRMAQIQKNLTDHIVVLGFGISGAEAVAELVARG
TDPGRIVVIDPDETRLAVAAELGCNVMAADATRDATLMDVHIASACAVLISAGRDDTSILITLTARHLAPGVPISTVVRA
VDNEALARQAGASTVINPVRFTGLLLAGSSQGTHVADYLTDLASIEGRVQLVERTVSPEEVGKPLATLASGGRGLRIHRG
DRIVGFWEDAAQALEPGDVIVEIVPTR

Sequences:

>Translated_347_residues
MRLDLHMLRQVGRKPVTVLRRALKVPVWADLGMRLGAALALVMLVVMVHWFDRAGLKDSHDGTVSFLDVVYFTMISITTT
GFGDIAPVSDRSRLIEAVIVTPIRVLVLFIFVGTAYNFIIKRSWERWRMAQIQKNLTDHIVVLGFGISGAEAVAELVARG
TDPGRIVVIDPDETRLAVAAELGCNVMAADATRDATLMDVHIASACAVLISAGRDDTSILITLTARHLAPGVPISTVVRA
VDNEALARQAGASTVINPVRFTGLLLAGSSQGTHVADYLTDLASIEGRVQLVERTVSPEEVGKPLATLASGGRGLRIHRG
DRIVGFWEDAAQALEPGDVIVEIVPTR
>Mature_347_residues
MRLDLHMLRQVGRKPVTVLRRALKVPVWADLGMRLGAALALVMLVVMVHWFDRAGLKDSHDGTVSFLDVVYFTMISITTT
GFGDIAPVSDRSRLIEAVIVTPIRVLVLFIFVGTAYNFIIKRSWERWRMAQIQKNLTDHIVVLGFGISGAEAVAELVARG
TDPGRIVVIDPDETRLAVAAELGCNVMAADATRDATLMDVHIASACAVLISAGRDDTSILITLTARHLAPGVPISTVVRA
VDNEALARQAGASTVINPVRFTGLLLAGSSQGTHVADYLTDLASIEGRVQLVERTVSPEEVGKPLATLASGGRGLRIHRG
DRIVGFWEDAAQALEPGDVIVEIVPTR

Specific function: Probable potassium channel protein [H]

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013099
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF07885 Ion_trans_2; PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 37391; Mature: 37391

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDLHMLRQVGRKPVTVLRRALKVPVWADLGMRLGAALALVMLVVMVHWFDRAGLKDSH
CCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGTVSFLDVVYFTMISITTTGFGDIAPVSDRSRLIEAVIVTPIRVLVLFIFVGTAYNFII
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRSWERWRMAQIQKNLTDHIVVLGFGISGAEAVAELVARGTDPGRIVVIDPDETRLAVAA
HHCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEH
ELGCNVMAADATRDATLMDVHIASACAVLISAGRDDTSILITLTARHLAPGVPISTVVRA
HHCCCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCHHHHHHH
VDNEALARQAGASTVINPVRFTGLLLAGSSQGTHVADYLTDLASIEGRVQLVERTVSPEE
HHHHHHHHHCCCHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCHHH
VGKPLATLASGGRGLRIHRGDRIVGFWEDAAQALEPGDVIVEIVPTR
HCCHHHHHHCCCCEEEEECCCEEEEEHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MRLDLHMLRQVGRKPVTVLRRALKVPVWADLGMRLGAALALVMLVVMVHWFDRAGLKDSH
CCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGTVSFLDVVYFTMISITTTGFGDIAPVSDRSRLIEAVIVTPIRVLVLFIFVGTAYNFII
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRSWERWRMAQIQKNLTDHIVVLGFGISGAEAVAELVARGTDPGRIVVIDPDETRLAVAA
HHCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEH
ELGCNVMAADATRDATLMDVHIASACAVLISAGRDDTSILITLTARHLAPGVPISTVVRA
HHCCCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCCEEEEEEEEHHCCCCCCHHHHHHH
VDNEALARQAGASTVINPVRFTGLLLAGSSQGTHVADYLTDLASIEGRVQLVERTVSPEE
HHHHHHHHHCCCHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHCCCHHH
VGKPLATLASGGRGLRIHRGDRIVGFWEDAAQALEPGDVIVEIVPTR
HCCHHHHHHCCCCEEEEECCCEEEEEHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]