Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is aat

Identifier: 87198848

GI number: 87198848

Start: 879049

End: 879840

Strand: Reverse

Name: aat

Synonym: Saro_0826

Alternate gene names: 87198848

Gene position: 879840-879049 (Counterclockwise)

Preceding gene: 87198851

Following gene: 87198843

Centisome position: 24.7

GC content: 66.92

Gene sequence:

>792_bases
ATGTCGCGCATCGAACCCCACGCCATCCCGCCGGAGCTTCTGCTCAAGGCCTATCGCGCAGGCATCTTCCCGATGGCCGA
CAGCCGCGACGACCCGGAGGTGTTCTGGGTCGAGCCAAAGATGCGCGCAATTCTGCCGCTCGAAGGCTTCCATCTGTCCC
GGTCGCTTGCCCGGACCCTGCGCCGCGGCAAGTTCACCGTGACCTGCAATGCCGCGTTCGAGGCGGTCATCGATGCCTGC
GCCGCGCCGCGCCCCGGTGCCGAGGAAAGCTGGATCAGCGCCCGCATCCGCGAAAGCTACATTGGCCTGCACGAACATGG
CCACGCCCATTCGATCGAATGCTGGCACAACGGGCGACTGGTCGGCGGACTATACGGCGTAGGCTTCGCGCGGGTTTTCT
GCGGCGAATCGATGTTCAGCCGCGAACCGGACGCGTCGAAGGTGGCGCTTGCATGGCTTGTCGCTTCACTGCGCAAGGTC
GGTGCCGAACTGCTCGACTGCCAGTTCACCACCCCGCATCTCGCTTCACTGGGCGCGGTGGAAATCCCGCAATCGCAGTA
CCTTCAACTTCTGTCGAAGGCGCAGCGACCCTATTCGTCGGGCGAGCTTGCGGCAGCGCGGGCGCTGGCCGATGCCGTCG
GCGACGGGCTAGGCATTGGCGGCGCCGGCGTCGTCAAGGGCGATGCCGCGGCGCTCGGGCTGCCGGCGGGTTTTGCCGCG
CTGCGGGCCGAAGGCGCCGGCTCTTCCTCGCCGGGGAACGTCATCGCGCAGTCCTTGACCCACACGTCATAG

Upstream 100 bases:

>100_bases
ACCGATGCTCTACCAACTGAGCTACACTCCTGTGCTCGGGTTGGCCCCTTAGAGGGTTGACGCGGGGAGCGCAACCGACC
GAAACACATTATTGATCATT

Downstream 100 bases:

>100_bases
ACCGGGTGCTCGACAACGTTCAGCGAAGGTGCGTTACGGAACAGCCACCCCGAGAAGACCTTGCGCCAGGCGAGCTTTTC
CTGGGTCGTGGCGCGCTCTT

Product: leucyl/phenylalanyl-tRNA--protein transferase

Products: NA

Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSRIEPHAIPPELLLKAYRAGIFPMADSRDDPEVFWVEPKMRAILPLEGFHLSRSLARTLRRGKFTVTCNAAFEAVIDAC
AAPRPGAEESWISARIRESYIGLHEHGHAHSIECWHNGRLVGGLYGVGFARVFCGESMFSREPDASKVALAWLVASLRKV
GAELLDCQFTTPHLASLGAVEIPQSQYLQLLSKAQRPYSSGELAAARALADAVGDGLGIGGAGVVKGDAAALGLPAGFAA
LRAEGAGSSSPGNVIAQSLTHTS

Sequences:

>Translated_263_residues
MSRIEPHAIPPELLLKAYRAGIFPMADSRDDPEVFWVEPKMRAILPLEGFHLSRSLARTLRRGKFTVTCNAAFEAVIDAC
AAPRPGAEESWISARIRESYIGLHEHGHAHSIECWHNGRLVGGLYGVGFARVFCGESMFSREPDASKVALAWLVASLRKV
GAELLDCQFTTPHLASLGAVEIPQSQYLQLLSKAQRPYSSGELAAARALADAVGDGLGIGGAGVVKGDAAALGLPAGFAA
LRAEGAGSSSPGNVIAQSLTHTS
>Mature_262_residues
SRIEPHAIPPELLLKAYRAGIFPMADSRDDPEVFWVEPKMRAILPLEGFHLSRSLARTLRRGKFTVTCNAAFEAVIDACA
APRPGAEESWISARIRESYIGLHEHGHAHSIECWHNGRLVGGLYGVGFARVFCGESMFSREPDASKVALAWLVASLRKVG
AELLDCQFTTPHLASLGAVEIPQSQYLQLLSKAQRPYSSGELAAARALADAVGDGLGIGGAGVVKGDAAALGLPAGFAAL
RAEGAGSSSPGNVIAQSLTHTS

Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine

COG id: COG2360

COG function: function code O; Leu/Phe-tRNA-protein transferase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L/F-transferase family

Homologues:

Organism=Escherichia coli, GI1787111, Length=187, Percent_Identity=47.0588235294118, Blast_Score=157, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LFTR_NOVAD (Q2GA52)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_496105.1
- ProteinModelPortal:   Q2GA52
- SMR:   Q2GA52
- STRING:   Q2GA52
- GeneID:   3915880
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_0826
- NMPDR:   fig|48935.1.peg.3458
- eggNOG:   COG2360
- HOGENOM:   HBG485363
- OMA:   GEPILWW
- PhylomeDB:   Q2GA52
- ProtClustDB:   PRK00301
- BioCyc:   NARO279238:SARO_0826-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00688
- InterPro:   IPR016181
- InterPro:   IPR004616
- TIGRFAMs:   TIGR00667

Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase

EC number: =2.3.2.6

Molecular weight: Translated: 27853; Mature: 27722

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIEPHAIPPELLLKAYRAGIFPMADSRDDPEVFWVEPKMRAILPLEGFHLSRSLARTL
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHH
RRGKFTVTCNAAFEAVIDACAAPRPGAEESWISARIRESYIGLHEHGHAHSIECWHNGRL
HCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHCCCCCCEEEEEECCEE
VGGLYGVGFARVFCGESMFSREPDASKVALAWLVASLRKVGAELLDCQFTTPHLASLGAV
EEHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCE
EIPQSQYLQLLSKAQRPYSSGELAAARALADAVGDGLGIGGAGVVKGDAAALGLPAGFAA
ECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHCCCHHHHH
LRAEGAGSSSPGNVIAQSLTHTS
HHCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SRIEPHAIPPELLLKAYRAGIFPMADSRDDPEVFWVEPKMRAILPLEGFHLSRSLARTL
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHH
RRGKFTVTCNAAFEAVIDACAAPRPGAEESWISARIRESYIGLHEHGHAHSIECWHNGRL
HCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHCCCCCCEEEEEECCEE
VGGLYGVGFARVFCGESMFSREPDASKVALAWLVASLRKVGAELLDCQFTTPHLASLGAV
EEHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCE
EIPQSQYLQLLSKAQRPYSSGELAAARALADAVGDGLGIGGAGVVKGDAAALGLPAGFAA
ECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHCCCHHHHH
LRAEGAGSSSPGNVIAQSLTHTS
HHCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA