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The map label for this gene is 87198829

Identifier: 87198829

GI number: 87198829

Start: 858057

End: 859577

Strand: Reverse

Name: 87198829

Synonym: Saro_0807

Alternate gene names: NA

Gene position: 859577-858057 (Counterclockwise)

Preceding gene: 87198836

Following gene: 87198824

Centisome position: 24.13

GC content: 67.92

Gene sequence:

>1521_bases
ATGTTCGGGCTCAACTGCGGTTTGGCCTTCCACCTGCGCCAGAGCGGTTGCCAAGTCCAATGTTATTCTGCAAACTTGCG
AAGGCACACTTTGCAAATTGGAATACGGGAAATGGCCAGACGCCGCCTCTTTGCGGGAGAACAGCTCAAGGCCTTGCGCA
GCGCGCGCAAGCTGCGCCAGGGCGAAATGGCCGCGCTGCTGGGCATCAGCGCCTCCTACCTCTCGCAGATCGAGAACGAC
GAACGCCCGCTGACGCCGGCGCTGACGGACCGCCTGCAATCGAGCTTCCCCGTCGAATGGCAGGACTTCGCCTCGGACCG
GGTCGAGCCGGTCCTGGCCGCGCTGCGCGATGCCACCGCCGACCCGCTCATCGGCCAGGCCCTGCCGGGCGAGCAGGTGG
AGCGCGTGGCAGAACAATACCCCGCTTTCGCCCAGGCCTTCGCCCGCCTGTGGGACCAGCACCGCCGCTCGGTCCAGCGG
CTCGAGATCATCGATGAGGCACTGGGCTCCGACAACATCTCCGGCGGTCGACTGCCGTGGGAGGAAGTGCGCGACTGGTT
TCACCACGCCAACAACTACGTCGACGCCATCGACCGCGCTGCGGAACGGCTAGCCATCCGCCTTTCCGGCACCGGCATGT
CTCCCACGATGGGACAGATGGCGGTCTGGCTCGAAAGCCGGGGCATCGCGGTCGAGCAGGTCAGCGGCGGAGCCATGCGG
CGTTTCGACCCCGAGGCTCGCCGCCTCACCCTCGATCCAAACCAGCCGGTCGAGTCCGGCCGGTTCCAGATGGCCTACCA
GCTCGCCGCCGAAGCCCTGAGCGAGGAGATCGCGGCCATCGTGAACGAGGCGACGCTCCAATCCGCCGCCGCGCGCCAGC
TCCTCACCGTCGGCCTCGGCAACTATGCCGCGGGCGCGCTGATCATGCCCTATGAGTGGTTCCGCACCCGCGCGCGCGAA
CTGCGCCACGACATCGACCAGTTGCGCCAGCTCTTCGGCGCCAGTTTCGAACAGGTCTGCCACCGCCTGTCCACGCTGCA
ACGCCCCCAGGCGCGCGGCATTCCGATGTTCTTTTGCCGTGTCGACATGGCCGGGAACATCACCAAGCGCCATTCCGCCA
CGCGCCTGCAATTCGCCCGCTTCGGCGGCGCCTGCCCGCTATGGGTGGTGCACGAAGCCGTGGCGATCCCCGACCGCATC
CACGTCCAGGCCGCGGAGATGCCCGACGGCGTGCGCTACGTCTCGATCGCCAAGGGTCTGGTGAAGCCTTCGGGCAGCTA
CTATCGCCCGCCGCGCCGCTACGCCGTGGCGCTCGGCTGCGAGGCGGCGCTGGCGGACGAGTTCATCTACGCCGACGGCA
TCAATCTGGCGCGGCCCGAGGCGGTTACCCGCATCGGCATTTCCTGCCGCATCTGCCCGCGCGACCGCTGCGACCAGCGC
GCCTTCCCGCCCAGCGACCGGGCGATCCTCGTCGACCCCCACGCCCGCGACCTCGTCCCTTACGGAATCACCGACATCTA
G

Upstream 100 bases:

>100_bases
TCTTGAACGGTGATGACCAAAAACTGGCGCCCGGCTCCGGCCCGTTCCCCCTCCCCGGGGTGCGGACCGGAACCGGGCCC
GCATCTGCACCCGGTGAAGG

Downstream 100 bases:

>100_bases
GACGAACGTCGCGGCCTGGTGCAACCCGCTTGCCGTCGTCCGGGCGCGCGCCGGGACGACGGCGATCCGCAAGGGATCAG
GCGTTGGGGTTGGGCGCGAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MFGLNCGLAFHLRQSGCQVQCYSANLRRHTLQIGIREMARRRLFAGEQLKALRSARKLRQGEMAALLGISASYLSQIEND
ERPLTPALTDRLQSSFPVEWQDFASDRVEPVLAALRDATADPLIGQALPGEQVERVAEQYPAFAQAFARLWDQHRRSVQR
LEIIDEALGSDNISGGRLPWEEVRDWFHHANNYVDAIDRAAERLAIRLSGTGMSPTMGQMAVWLESRGIAVEQVSGGAMR
RFDPEARRLTLDPNQPVESGRFQMAYQLAAEALSEEIAAIVNEATLQSAAARQLLTVGLGNYAAGALIMPYEWFRTRARE
LRHDIDQLRQLFGASFEQVCHRLSTLQRPQARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWVVHEAVAIPDRI
HVQAAEMPDGVRYVSIAKGLVKPSGSYYRPPRRYAVALGCEAALADEFIYADGINLARPEAVTRIGISCRICPRDRCDQR
AFPPSDRAILVDPHARDLVPYGITDI

Sequences:

>Translated_506_residues
MFGLNCGLAFHLRQSGCQVQCYSANLRRHTLQIGIREMARRRLFAGEQLKALRSARKLRQGEMAALLGISASYLSQIEND
ERPLTPALTDRLQSSFPVEWQDFASDRVEPVLAALRDATADPLIGQALPGEQVERVAEQYPAFAQAFARLWDQHRRSVQR
LEIIDEALGSDNISGGRLPWEEVRDWFHHANNYVDAIDRAAERLAIRLSGTGMSPTMGQMAVWLESRGIAVEQVSGGAMR
RFDPEARRLTLDPNQPVESGRFQMAYQLAAEALSEEIAAIVNEATLQSAAARQLLTVGLGNYAAGALIMPYEWFRTRARE
LRHDIDQLRQLFGASFEQVCHRLSTLQRPQARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWVVHEAVAIPDRI
HVQAAEMPDGVRYVSIAKGLVKPSGSYYRPPRRYAVALGCEAALADEFIYADGINLARPEAVTRIGISCRICPRDRCDQR
AFPPSDRAILVDPHARDLVPYGITDI
>Mature_506_residues
MFGLNCGLAFHLRQSGCQVQCYSANLRRHTLQIGIREMARRRLFAGEQLKALRSARKLRQGEMAALLGISASYLSQIEND
ERPLTPALTDRLQSSFPVEWQDFASDRVEPVLAALRDATADPLIGQALPGEQVERVAEQYPAFAQAFARLWDQHRRSVQR
LEIIDEALGSDNISGGRLPWEEVRDWFHHANNYVDAIDRAAERLAIRLSGTGMSPTMGQMAVWLESRGIAVEQVSGGAMR
RFDPEARRLTLDPNQPVESGRFQMAYQLAAEALSEEIAAIVNEATLQSAAARQLLTVGLGNYAAGALIMPYEWFRTRARE
LRHDIDQLRQLFGASFEQVCHRLSTLQRPQARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWVVHEAVAIPDRI
HVQAAEMPDGVRYVSIAKGLVKPSGSYYRPPRRYAVALGCEAALADEFIYADGINLARPEAVTRIGISCRICPRDRCDQR
AFPPSDRAILVDPHARDLVPYGITDI

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 56518; Mature: 56518

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLNCGLAFHLRQSGCQVQCYSANLRRHTLQIGIREMARRRLFAGEQLKALRSARKLRQ
CCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GEMAALLGISASYLSQIENDERPLTPALTDRLQSSFPVEWQDFASDRVEPVLAALRDATA
CCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
DPLIGQALPGEQVERVAEQYPAFAQAFARLWDQHRRSVQRLEIIDEALGSDNISGGRLPW
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
EEVRDWFHHANNYVDAIDRAAERLAIRLSGTGMSPTMGQMAVWLESRGIAVEQVSGGAMR
HHHHHHHHHHCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCC
RFDPEARRLTLDPNQPVESGRFQMAYQLAAEALSEEIAAIVNEATLQSAAARQLLTVGLG
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYAAGALIMPYEWFRTRARELRHDIDQLRQLFGASFEQVCHRLSTLQRPQARGIPMFFCR
CHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEE
VDMAGNITKRHSATRLQFARFGGACPLWVVHEAVAIPDRIHVQAAEMPDGVRYVSIAKGL
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHH
VKPSGSYYRPPRRYAVALGCEAALADEFIYADGINLARPEAVTRIGISCRICPRDRCDQR
CCCCCCCCCCCHHEEEEECCHHHHHHHHHEECCCCCCCCHHHHEECCEEEECCCCCCCCC
AFPPSDRAILVDPHARDLVPYGITDI
CCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGLNCGLAFHLRQSGCQVQCYSANLRRHTLQIGIREMARRRLFAGEQLKALRSARKLRQ
CCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GEMAALLGISASYLSQIENDERPLTPALTDRLQSSFPVEWQDFASDRVEPVLAALRDATA
CCHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
DPLIGQALPGEQVERVAEQYPAFAQAFARLWDQHRRSVQRLEIIDEALGSDNISGGRLPW
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
EEVRDWFHHANNYVDAIDRAAERLAIRLSGTGMSPTMGQMAVWLESRGIAVEQVSGGAMR
HHHHHHHHHHCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCC
RFDPEARRLTLDPNQPVESGRFQMAYQLAAEALSEEIAAIVNEATLQSAAARQLLTVGLG
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NYAAGALIMPYEWFRTRARELRHDIDQLRQLFGASFEQVCHRLSTLQRPQARGIPMFFCR
CHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEE
VDMAGNITKRHSATRLQFARFGGACPLWVVHEAVAIPDRIHVQAAEMPDGVRYVSIAKGL
ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHH
VKPSGSYYRPPRRYAVALGCEAALADEFIYADGINLARPEAVTRIGISCRICPRDRCDQR
CCCCCCCCCCCHHEEEEECCHHHHHHHHHEECCCCCCCCHHHHEECCEEEECCCCCCCCC
AFPPSDRAILVDPHARDLVPYGITDI
CCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]