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The map label for this gene is 87198836

Identifier: 87198836

GI number: 87198836

Start: 866733

End: 867068

Strand: Reverse

Name: 87198836

Synonym: Saro_0814

Alternate gene names: NA

Gene position: 867068-866733 (Counterclockwise)

Preceding gene: 87198838

Following gene: 87198829

Centisome position: 24.35

GC content: 63.39

Gene sequence:

>336_bases
ATGCGCGATGAGCGACAACCCTGCGTCTACATCCTCGCCAGCCAGCCGCGCGGCACGCTCTACATCGGCGTTACGTCCAA
CCTCATCGGCAGGTTGTGGCAGCACCGCGAAAGCATGATTCCCGGCTTCACCAGCCAATACGCCGTCCACCGCCTCGTCT
ACTTCGAGCAGTTCGACGAGATGATCCCCGCCATCACCCGCGAGAAGCAACTCAAGCGCTGGCACCGGCAGTGGAAGATC
AACCTGATCGAGAGCGCGAATCCTGATTGGCACGACCTTGCTCCGGGGCTCGGTCTTGGCCCGCCAGCTCCGCGCACGCC
GAGGGATGGACCCTGA

Upstream 100 bases:

>100_bases
CATGACGGGTGCCTGCGATTGAGAGAGATGCTGCAGAAACGGCACCATCTCCATCACCCTGAACTTGTTTCAGGGTCCAC
CCTTCCGCAAACACGGAGCC

Downstream 100 bases:

>100_bases
AACAAGTTCAGGGTGACGACCATCCACAAGGCAAGGCGAAGCTGCCAAGATCACACCAGCTCCAGCGCCTGCGCGAGGTC
GGCGACGATGTCGTCGATGT

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRDERQPCVYILASQPRGTLYIGVTSNLIGRLWQHRESMIPGFTSQYAVHRLVYFEQFDEMIPAITREKQLKRWHRQWKI
NLIESANPDWHDLAPGLGLGPPAPRTPRDGP

Sequences:

>Translated_111_residues
MRDERQPCVYILASQPRGTLYIGVTSNLIGRLWQHRESMIPGFTSQYAVHRLVYFEQFDEMIPAITREKQLKRWHRQWKI
NLIESANPDWHDLAPGLGLGPPAPRTPRDGP
>Mature_111_residues
MRDERQPCVYILASQPRGTLYIGVTSNLIGRLWQHRESMIPGFTSQYAVHRLVYFEQFDEMIPAITREKQLKRWHRQWKI
NLIESANPDWHDLAPGLGLGPPAPRTPRDGP

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12920; Mature: 12920

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDERQPCVYILASQPRGTLYIGVTSNLIGRLWQHRESMIPGFTSQYAVHRLVYFEQFDE
CCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MIPAITREKQLKRWHRQWKINLIESANPDWHDLAPGLGLGPPAPRTPRDGP
HHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDERQPCVYILASQPRGTLYIGVTSNLIGRLWQHRESMIPGFTSQYAVHRLVYFEQFDE
CCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MIPAITREKQLKRWHRQWKINLIESANPDWHDLAPGLGLGPPAPRTPRDGP
HHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA