Click here to switch to the map view.

The map label for this gene is 87198823

Identifier: 87198823

GI number: 87198823

Start: 851855

End: 852331

Strand: Reverse

Name: 87198823

Synonym: Saro_0801

Alternate gene names: NA

Gene position: 852331-851855 (Counterclockwise)

Preceding gene: 87198824

Following gene: 87198816

Centisome position: 23.93

GC content: 66.46

Gene sequence:

>477_bases
ATGATCCAGCCCGGAGCGGTGCGGCCCGGCCTCGAGTTCGTCTACGAAGCGACCGGCGACCTCGAGCCGCCGGTCGCGAT
CGGCGAGACCTATGACGGGACGCGGCGGATCATTCCGATCGTTGGCGGCGGGCGCGTGGAAGGACCGCTGATCAAGGGCA
GGCTGATCGGCAATGCCGCCGATTGGCAGGTGACGCGGCCCGACGGGGTGACCGTGGCCGATGCGATCTACGCGCTGGAG
ACCGATGACGGGGTGGTGATCCAGATCCGCAACCGCGGGCTGAGGCATGGACCGCCCGAGGTGATGCAGCGACTGGCGTC
GGGGCAGGAAGTGGACCCGGCGGAATACTATTTCCGCACGGTACCCGAGTTCATCGCACCCGTGGGGAAGTACGACTGGA
TGAACCGGTCGATCTTCGTGTGTTCGGGCGCGCGATATCCGCTGGGGATCAAGCTTTGGGTGTGGCGGGTGACCTGA

Upstream 100 bases:

>100_bases
CGGTGGCCACGGTCAACATCCCCATCCGCCTGCGCTTCGGCCTTCACGGCAACTGGGCGAATGCCGACGAAATCGGCCTT
GCCGAGAAGGTCCTGGCCGC

Downstream 100 bases:

>100_bases
ACATGCATGCGCCCCATCTTTCGGCAGGCGGCAAGCCGAGGGATGGGGCGCTGACATTTCTCCGCCTGTTCCGGTTCGCG
CCGAACGAAGTCGAGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MIQPGAVRPGLEFVYEATGDLEPPVAIGETYDGTRRIIPIVGGGRVEGPLIKGRLIGNAADWQVTRPDGVTVADAIYALE
TDDGVVIQIRNRGLRHGPPEVMQRLASGQEVDPAEYYFRTVPEFIAPVGKYDWMNRSIFVCSGARYPLGIKLWVWRVT

Sequences:

>Translated_158_residues
MIQPGAVRPGLEFVYEATGDLEPPVAIGETYDGTRRIIPIVGGGRVEGPLIKGRLIGNAADWQVTRPDGVTVADAIYALE
TDDGVVIQIRNRGLRHGPPEVMQRLASGQEVDPAEYYFRTVPEFIAPVGKYDWMNRSIFVCSGARYPLGIKLWVWRVT
>Mature_158_residues
MIQPGAVRPGLEFVYEATGDLEPPVAIGETYDGTRRIIPIVGGGRVEGPLIKGRLIGNAADWQVTRPDGVTVADAIYALE
TDDGVVIQIRNRGLRHGPPEVMQRLASGQEVDPAEYYFRTVPEFIAPVGKYDWMNRSIFVCSGARYPLGIKLWVWRVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0311 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR020915 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17453; Mature: 17453

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQPGAVRPGLEFVYEATGDLEPPVAIGETYDGTRRIIPIVGGGRVEGPLIKGRLIGNAA
CCCCCCCCCCHHEEEECCCCCCCCEEECCCCCCCEEEEEEECCCEECCCEEEEEEECCCC
DWQVTRPDGVTVADAIYALETDDGVVIQIRNRGLRHGPPEVMQRLASGQEVDPAEYYFRT
CEEEECCCCCEEEHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
VPEFIAPVGKYDWMNRSIFVCSGARYPLGIKLWVWRVT
HHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MIQPGAVRPGLEFVYEATGDLEPPVAIGETYDGTRRIIPIVGGGRVEGPLIKGRLIGNAA
CCCCCCCCCCHHEEEECCCCCCCCEEECCCCCCCEEEEEEECCCEECCCEEEEEEECCCC
DWQVTRPDGVTVADAIYALETDDGVVIQIRNRGLRHGPPEVMQRLASGQEVDPAEYYFRT
CEEEECCCCCEEEHEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
VPEFIAPVGKYDWMNRSIFVCSGARYPLGIKLWVWRVT
HHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]