| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198794
Identifier: 87198794
GI number: 87198794
Start: 819769
End: 820344
Strand: Reverse
Name: 87198794
Synonym: Saro_0771
Alternate gene names: NA
Gene position: 820344-819769 (Counterclockwise)
Preceding gene: 87198795
Following gene: 87198793
Centisome position: 23.03
GC content: 62.33
Gene sequence:
>576_bases ATGAAAAAGATTGTTCTCCTTGCCGCTGTTGCATCAGCTGCGGCAATTGCATCGCCGGCTGCCGCACAAGCAACCGGCTC GGTCACGGTAACTGGATCGGTTGCGGACAAGTGCTTCGCGATCGCGCCCATCTCGGACACCATCACGCTTGGTGAACTGT CCCTGCAGACCGGCGTGAATGCCGGGACCGTGGATTCCGCATTCTCGTCGAACACGGGGGGCCTTTCGCGCTCCTTCTCG GTTCGCTGCACCACGACGACACCGACGATCACCGTGTCGGCACTCCCGTTGACCATCAGCGGCAACGCAGGGACATCGGG CGGCTACACCGGAACGGTCCATTACACCTCCACGCTGACGGCCCAGAAGGCTGGCGGCGGGGCCGACGCCAGCGCGGTCT ACACTACTGCAGATTCGCTCCCGGCGGCGACCACAACGAGTGTCGGCGACCGGCTGAAGAACGCGACCAACAACGTCACC GTGACAGTATCCAACGGAACAACCACCAATGGCACCGACCAGCTCAAGGCGGGCAGCTATTCGGGGTCTATCTCGATCAC CGTGTCACCGGTCTGA
Upstream 100 bases:
>100_bases GACGGTTACGGTTTCGGCTTCGCCCTGATTTCACGGCGGACATGAATGCGGTTGCAAGGCCGCGACAAGTTGAGCCGGAG ACGGCTGGAAAGGAAGGAAG
Downstream 100 bases:
>100_bases TCGGGCACAAGGGGGAAAACCTATGCGCAAGTCACTTTCCATCATCGTCCCGCTTGTAATGCTGGCGAGCCCTGCAACGG CCCAGGATGCGACCGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKKIVLLAAVASAAAIASPAAAQATGSVTVTGSVADKCFAIAPISDTITLGELSLQTGVNAGTVDSAFSSNTGGLSRSFS VRCTTTTPTITVSALPLTISGNAGTSGGYTGTVHYTSTLTAQKAGGGADASAVYTTADSLPAATTTSVGDRLKNATNNVT VTVSNGTTTNGTDQLKAGSYSGSISITVSPV
Sequences:
>Translated_191_residues MKKIVLLAAVASAAAIASPAAAQATGSVTVTGSVADKCFAIAPISDTITLGELSLQTGVNAGTVDSAFSSNTGGLSRSFS VRCTTTTPTITVSALPLTISGNAGTSGGYTGTVHYTSTLTAQKAGGGADASAVYTTADSLPAATTTSVGDRLKNATNNVT VTVSNGTTTNGTDQLKAGSYSGSISITVSPV >Mature_191_residues MKKIVLLAAVASAAAIASPAAAQATGSVTVTGSVADKCFAIAPISDTITLGELSLQTGVNAGTVDSAFSSNTGGLSRSFS VRCTTTTPTITVSALPLTISGNAGTSGGYTGTVHYTSTLTAQKAGGGADASAVYTTADSLPAATTTSVGDRLKNATNNVT VTVSNGTTTNGTDQLKAGSYSGSISITVSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18575; Mature: 18575
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVLLAAVASAAAIASPAAAQATGSVTVTGSVADKCFAIAPISDTITLGELSLQTGVN CCEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEECCCC AGTVDSAFSSNTGGLSRSFSVRCTTTTPTITVSALPLTISGNAGTSGGYTGTVHYTSTLT CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEE AQKAGGGADASAVYTTADSLPAATTTSVGDRLKNATNNVTVTVSNGTTTNGTDQLKAGSY EECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCC SGSISITVSPV CCEEEEEEECC >Mature Secondary Structure MKKIVLLAAVASAAAIASPAAAQATGSVTVTGSVADKCFAIAPISDTITLGELSLQTGVN CCEEEEEEEHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEECCCC AGTVDSAFSSNTGGLSRSFSVRCTTTTPTITVSALPLTISGNAGTSGGYTGTVHYTSTLT CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEE AQKAGGGADASAVYTTADSLPAATTTSVGDRLKNATNNVTVTVSNGTTTNGTDQLKAGSY EECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEECCCC SGSISITVSPV CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA