Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198795

Identifier: 87198795

GI number: 87198795

Start: 820417

End: 821043

Strand: Reverse

Name: 87198795

Synonym: Saro_0772

Alternate gene names: NA

Gene position: 821043-820417 (Counterclockwise)

Preceding gene: 87198797

Following gene: 87198794

Centisome position: 23.05

GC content: 61.56

Gene sequence:

>627_bases
GTGCTTGGCGTGTGCATCAGGATGAGGGGACTGGCGGGAGCCTTGGGCACCGCTTGGCTTCTTGCGGCTGCACCAGCCTG
CGCCCAGGCGCTTTCGGCGACCGTATATGCGCCAGGGGATGGAGCGCCCAATTCGCTTACATTTACAGTTCCGGTGACTG
CATCGATTGGCGGCATCTGCGGCTTTGCGACCGCTCCTAGCGGCAATTACGACGCTGGCGCTCTGGACACGAATACCTGG
ACCAACGACTTCGCGTTCAAGTTGAACTGCACCGTTCCGTCTCGTGTCGCCGTGGTCTCTTCCAATGGTGGCCTGTTGAC
GCCGGCAGCGCCCGGAGCGCCCGGTTACACCAACAAGGCGCCCTATACGGTGACCTTGAAGCTGCAGGGTTCGTCCACTT
CGGCAATGGCCAACTGCCCGGCGGCAGACCTTTCGCCCACGGCAGCGAACCCTTGCTCATTTCGTGGGGCATCGTCGTCC
ACGCAGGGGCTACGGCTCGACGATACGTCGATCAACGTCGACGGCTCATATCTTCGCGTCAATGCGCCGGCCTATTCGGG
GGCCGATGCCCTGATCAACGGAAATTACACTGACACTCTGACGGTTACGGTTTCGGCTTCGCCCTGA

Upstream 100 bases:

>100_bases
ATTCGAAGTCAAAGGAAAACAGGGTCCTACGTAAAATCTACTAAAACACTGTCCGGTTGGCCGGGCAGAGCGAAGACGTA
TGACCGGAGGAACTGGATCA

Downstream 100 bases:

>100_bases
TTTCACGGCGGACATGAATGCGGTTGCAAGGCCGCGACAAGTTGAGCCGGAGACGGCTGGAAAGGAAGGAAGATGAAAAA
GATTGTTCTCCTTGCCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW
TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS
TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP

Sequences:

>Translated_208_residues
MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW
TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS
TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP
>Mature_208_residues
MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW
TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS
TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20734; Mature: 20734

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGIC
CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCEE
GFATAPSGNYDAGALDTNTWTNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKA
EEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCC
PYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSSTQGLRLDDTSINVDGSYLRV
CEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEE
NAPAYSGADALINGNYTDTLTVTVSASP
ECCCCCCCCEEEECCCCEEEEEEEECCC
>Mature Secondary Structure
MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGIC
CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCEE
GFATAPSGNYDAGALDTNTWTNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKA
EEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCC
PYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSSTQGLRLDDTSINVDGSYLRV
CEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEE
NAPAYSGADALINGNYTDTLTVTVSASP
ECCCCCCCCEEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA