| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198795
Identifier: 87198795
GI number: 87198795
Start: 820417
End: 821043
Strand: Reverse
Name: 87198795
Synonym: Saro_0772
Alternate gene names: NA
Gene position: 821043-820417 (Counterclockwise)
Preceding gene: 87198797
Following gene: 87198794
Centisome position: 23.05
GC content: 61.56
Gene sequence:
>627_bases GTGCTTGGCGTGTGCATCAGGATGAGGGGACTGGCGGGAGCCTTGGGCACCGCTTGGCTTCTTGCGGCTGCACCAGCCTG CGCCCAGGCGCTTTCGGCGACCGTATATGCGCCAGGGGATGGAGCGCCCAATTCGCTTACATTTACAGTTCCGGTGACTG CATCGATTGGCGGCATCTGCGGCTTTGCGACCGCTCCTAGCGGCAATTACGACGCTGGCGCTCTGGACACGAATACCTGG ACCAACGACTTCGCGTTCAAGTTGAACTGCACCGTTCCGTCTCGTGTCGCCGTGGTCTCTTCCAATGGTGGCCTGTTGAC GCCGGCAGCGCCCGGAGCGCCCGGTTACACCAACAAGGCGCCCTATACGGTGACCTTGAAGCTGCAGGGTTCGTCCACTT CGGCAATGGCCAACTGCCCGGCGGCAGACCTTTCGCCCACGGCAGCGAACCCTTGCTCATTTCGTGGGGCATCGTCGTCC ACGCAGGGGCTACGGCTCGACGATACGTCGATCAACGTCGACGGCTCATATCTTCGCGTCAATGCGCCGGCCTATTCGGG GGCCGATGCCCTGATCAACGGAAATTACACTGACACTCTGACGGTTACGGTTTCGGCTTCGCCCTGA
Upstream 100 bases:
>100_bases ATTCGAAGTCAAAGGAAAACAGGGTCCTACGTAAAATCTACTAAAACACTGTCCGGTTGGCCGGGCAGAGCGAAGACGTA TGACCGGAGGAACTGGATCA
Downstream 100 bases:
>100_bases TTTCACGGCGGACATGAATGCGGTTGCAAGGCCGCGACAAGTTGAGCCGGAGACGGCTGGAAAGGAAGGAAGATGAAAAA GATTGTTCTCCTTGCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP
Sequences:
>Translated_208_residues MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP >Mature_208_residues MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGICGFATAPSGNYDAGALDTNTW TNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKAPYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSS TQGLRLDDTSINVDGSYLRVNAPAYSGADALINGNYTDTLTVTVSASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20734; Mature: 20734
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGIC CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCEE GFATAPSGNYDAGALDTNTWTNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKA EEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCC PYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSSTQGLRLDDTSINVDGSYLRV CEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEE NAPAYSGADALINGNYTDTLTVTVSASP ECCCCCCCCEEEECCCCEEEEEEEECCC >Mature Secondary Structure MLGVCIRMRGLAGALGTAWLLAAAPACAQALSATVYAPGDGAPNSLTFTVPVTASIGGIC CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCEE GFATAPSGNYDAGALDTNTWTNDFAFKLNCTVPSRVAVVSSNGGLLTPAAPGAPGYTNKA EEECCCCCCCCCCCEECCCCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCC PYTVTLKLQGSSTSAMANCPAADLSPTAANPCSFRGASSSTQGLRLDDTSINVDGSYLRV CEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCCEEEE NAPAYSGADALINGNYTDTLTVTVSASP ECCCCCCCCEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA