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The map label for this gene is ccpA [H]

Identifier: 87198779

GI number: 87198779

Start: 802606

End: 803679

Strand: Reverse

Name: ccpA [H]

Synonym: Saro_0755

Alternate gene names: 87198779

Gene position: 803679-802606 (Counterclockwise)

Preceding gene: 87198782

Following gene: 87198762

Centisome position: 22.57

GC content: 64.99

Gene sequence:

>1074_bases
GTGCAGGACCCGGAAAGGAAACCGCGACAAAGGGGAGCGCGGAGAGCTGGAGGTCAGCCGACAGTCGCGGACGTGGCACG
CCTGGCGGGCGTATCGCCGATGACGGTCAGCCGCGTCGTCAACAGCGAATCCTATGTGACCGAGGATACGCGCACTCGCG
TGCAGCAGGCGATCGAGAAGCTGGGCTATGTTCCGAACCTCGCCGCCCGCAGTCTTGCCGGGGGGCAGCAGTGCAAGGTA
GCCCTGCTTTACGACAACCCTTCGTCTGCCTACCTCAGCGAGTTCCTGGTGGGCAGCCTCGCGGCGGCCTCATCAGAGAA
TGCCCAGTTGGTCATCGAACAGTGCGATCCGGCTGAAGCGGCAAGCACCCTGGTAAAGCGGCTGAAGCGGCATCGCATCG
ACTGCGTGGTCCTGCCACCGCCGCTTTGCGACGATTCCGACCTGCTCGACCAGCTACGCAAGACCGGCTGGCCCATCTGC
CAGGTCGCGACGGGCCAGCCCGCCCCTGATGCCATGTCGGTATCGATCGACGACGAAGCGGCCGCATATGCCATCACCGA
ACATCTGATAGGAATGGGCCACCGCAAGATCGGGTTCATAACCGGCGACACCCGGCAATCCGTTTCAAGTCAGCGCCTGA
CGGGATACCAGCGGGCACTGCGGGACGCCGGCCTTTCCGTCAATCCGGGGTACATTGCACCGGGCGACTTCAGCTATCGG
TCGGGGCTTGCCGCCGCCGAGGCACTGCTGGGCCAACCGGATCGACCAACGGCCATCCTCGCGAGCAACGACGACATGGC
TGCCGCCGCGATTTCCGTTGCACACCGGCACGGGCTGGATGTGCCTTCGGCCCTTTCGATCTGTGGTTACGACGATACGG
CCCTGGCAACGACGATCTGGCCGGAGCTTACCACGATCCGCCAACCAGTCGCCGAGATGGCCGAGGCGGGAACGCGGATG
GCAATTTCTGCGACCCGCGATCCTGCCCGGACGGAAACGCCGCCCCAACGCGTCGTGCTGGACTTCCAACTGGTCTGCCG
CAATTCCGCGTCCGCGCCGGGCAAGCAGGCCTGA

Upstream 100 bases:

>100_bases
CCGGTGGACCTTCTTGCTGCATAAGGTAGCGTTATCATAACTACATTTGCAAGTCTGGAATGGCTGGCGTAGACCGCCCG
GGGCATTGAAAGAGGCATTG

Downstream 100 bases:

>100_bases
CATAGATCTCTGCCCCGGTCGGGCGGCGGCGAAGCGCCAGGCCGGTCACGCGACATGCGCCATGCCCCGCCCCGGCCGCC
TCGCCGCCGAAAACGTCAAA

Product: LacI family transcription regulator

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MQDPERKPRQRGARRAGGQPTVADVARLAGVSPMTVSRVVNSESYVTEDTRTRVQQAIEKLGYVPNLAARSLAGGQQCKV
ALLYDNPSSAYLSEFLVGSLAAASSENAQLVIEQCDPAEAASTLVKRLKRHRIDCVVLPPPLCDDSDLLDQLRKTGWPIC
QVATGQPAPDAMSVSIDDEAAAYAITEHLIGMGHRKIGFITGDTRQSVSSQRLTGYQRALRDAGLSVNPGYIAPGDFSYR
SGLAAAEALLGQPDRPTAILASNDDMAAAAISVAHRHGLDVPSALSICGYDDTALATTIWPELTTIRQPVAEMAEAGTRM
AISATRDPARTETPPQRVVLDFQLVCRNSASAPGKQA

Sequences:

>Translated_357_residues
MQDPERKPRQRGARRAGGQPTVADVARLAGVSPMTVSRVVNSESYVTEDTRTRVQQAIEKLGYVPNLAARSLAGGQQCKV
ALLYDNPSSAYLSEFLVGSLAAASSENAQLVIEQCDPAEAASTLVKRLKRHRIDCVVLPPPLCDDSDLLDQLRKTGWPIC
QVATGQPAPDAMSVSIDDEAAAYAITEHLIGMGHRKIGFITGDTRQSVSSQRLTGYQRALRDAGLSVNPGYIAPGDFSYR
SGLAAAEALLGQPDRPTAILASNDDMAAAAISVAHRHGLDVPSALSICGYDDTALATTIWPELTTIRQPVAEMAEAGTRM
AISATRDPARTETPPQRVVLDFQLVCRNSASAPGKQA
>Mature_357_residues
MQDPERKPRQRGARRAGGQPTVADVARLAGVSPMTVSRVVNSESYVTEDTRTRVQQAIEKLGYVPNLAARSLAGGQQCKV
ALLYDNPSSAYLSEFLVGSLAAASSENAQLVIEQCDPAEAASTLVKRLKRHRIDCVVLPPPLCDDSDLLDQLRKTGWPIC
QVATGQPAPDAMSVSIDDEAAAYAITEHLIGMGHRKIGFITGDTRQSVSSQRLTGYQRALRDAGLSVNPGYIAPGDFSYR
SGLAAAEALLGQPDRPTAILASNDDMAAAAISVAHRHGLDVPSALSICGYDDTALATTIWPELTTIRQPVAEMAEAGTRM
AISATRDPARTETPPQRVVLDFQLVCRNSASAPGKQA

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789068, Length=298, Percent_Identity=33.2214765100671, Blast_Score=161, Evalue=7e-41,
Organism=Escherichia coli, GI1787948, Length=329, Percent_Identity=31.0030395136778, Blast_Score=154, Evalue=7e-39,
Organism=Escherichia coli, GI1790194, Length=334, Percent_Identity=32.6347305389222, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1789202, Length=338, Percent_Identity=31.6568047337278, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1790369, Length=304, Percent_Identity=32.2368421052632, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1788474, Length=303, Percent_Identity=30.6930693069307, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1786540, Length=290, Percent_Identity=30.6896551724138, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787580, Length=304, Percent_Identity=28.9473684210526, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI48994940, Length=329, Percent_Identity=24.3161094224924, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1790715, Length=312, Percent_Identity=24.6794871794872, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787906, Length=251, Percent_Identity=27.4900398406374, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789456, Length=313, Percent_Identity=26.1980830670927, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790689, Length=296, Percent_Identity=28.7162162162162, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38017; Mature: 38017

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPERKPRQRGARRAGGQPTVADVARLAGVSPMTVSRVVNSESYVTEDTRTRVQQAIEK
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHCCHHHHHHHHHHHHH
LGYVPNLAARSLAGGQQCKVALLYDNPSSAYLSEFLVGSLAAASSENAQLVIEQCDPAEA
HCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
ASTLVKRLKRHRIDCVVLPPPLCDDSDLLDQLRKTGWPICQVATGQPAPDAMSVSIDDEA
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCHH
AAYAITEHLIGMGHRKIGFITGDTRQSVSSQRLTGYQRALRDAGLSVNPGYIAPGDFSYR
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
SGLAAAEALLGQPDRPTAILASNDDMAAAAISVAHRHGLDVPSALSICGYDDTALATTIW
HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHH
PELTTIRQPVAEMAEAGTRMAISATRDPARTETPPQRVVLDFQLVCRNSASAPGKQA
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEEEHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQDPERKPRQRGARRAGGQPTVADVARLAGVSPMTVSRVVNSESYVTEDTRTRVQQAIEK
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHCCCHHCCHHHHHHHHHHHHH
LGYVPNLAARSLAGGQQCKVALLYDNPSSAYLSEFLVGSLAAASSENAQLVIEQCDPAEA
HCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH
ASTLVKRLKRHRIDCVVLPPPLCDDSDLLDQLRKTGWPICQVATGQPAPDAMSVSIDDEA
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCHH
AAYAITEHLIGMGHRKIGFITGDTRQSVSSQRLTGYQRALRDAGLSVNPGYIAPGDFSYR
HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHH
SGLAAAEALLGQPDRPTAILASNDDMAAAAISVAHRHGLDVPSALSICGYDDTALATTIW
HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHH
PELTTIRQPVAEMAEAGTRMAISATRDPARTETPPQRVVLDFQLVCRNSASAPGKQA
HHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEEEHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]