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The map label for this gene is bexD [H]

Identifier: 87198752

GI number: 87198752

Start: 769458

End: 770678

Strand: Reverse

Name: bexD [H]

Synonym: Saro_0728

Alternate gene names: 87198752

Gene position: 770678-769458 (Counterclockwise)

Preceding gene: 87198753

Following gene: 87198751

Centisome position: 21.64

GC content: 65.19

Gene sequence:

>1221_bases
TTGGTTCGGCACCGCAACGCAATCGTCACTGTTACGTTACGAACGATGTACCGGAACAGCAGATATCGGGGCGGCCGAGG
AGATGGCGGGAGCGGGGCGCGCAGCTGCCATGCGGCCATTCTCGCCCTGCTTGCCGGCAGCGCGACAGGCGGTTGCGCCG
CGCTGCCGGCAAGCGGGCCAACCGGGCAAGCAATCGTCAGGTCGGCAAAGGCGCCCGGCGCGGCAATGCCATACCGCCTG
GTCACGCTCGACAGCCTTTCCGCACTGCCTGCACCTAGTGCCTTCGCGCCCGGCATGCCCATGCGATTGGCGCCTCCCCC
GACCGACCTCGTAGGACCGGCCGACGTACTCGACATCGCGATCTACGAAGCAGGCGTGGCCCTGTTCTCAAATGAAGGCG
GCGGGAACCCGATGGCTGCTGGAGGAGCGGAGGCTGCCGCCAGATCTACCCGTCTCCCTCCCGTTCGCGTGGATGACGAA
GGCAGGATCAGCCTGCCCTTCGTGGGGCAAGTCCGCGCCATGGGCCACACCACGGCAGAACTGCAGGCCATCATCCGCAA
AGCGCTGCAACCGATGTCGCAGGACCCGCAGGTCATGGTGTCGGTCCAGCAATCGATCACCAACAGCGTGATCCTGAGCG
GGGAGGTCGCCCGGCCGGGACGACTGGTCCTCGCCACGAACCGCGAGACTCTGGCCGAGACGATTGCCCTTGCCGGCGGG
CAGAAGGGCGATGCGAAGGACATAGTCGCACGGCTATCGAGGAAGGACCGCACCTGGGAAATCCGGTTGAACGACCTTCT
GGCCGATGATCGCCAAGACATTCCCGTCTACCCCGGCGACCGTATCACGCTCGTCAGCCAGCCGCTGACCTTCGCGGTCA
TGGGCGCACCGAACAAGGTAGACCATTTCCGCTTCCCCCGGTCTTCCATGTCGCTGGCGGAAGCGGTTGCACTGGCAGGC
GGTGCCAATCCCGATCTGGGCGATGCCGCCGCCGTGTTCGTATTCCGCTTCGAGAGACGCGAGGATGGCTCGGAGGAACC
GGTCGTCTTCCATCTCGACATGCTGCGCCCAGGTGCCGTCTTCATCTCGCAACGGTTCGCGATGACGGACAGGGACGTGC
TGTATATCGGCAATGCCCGGGCCAACCAGCCGGGCAAGCTGATCCAGCTCATCAGCCAGCTCTTCGCGCCGGTCGTCACG
GTAGAGCGATTGGCCCGATGA

Upstream 100 bases:

>100_bases
ACCCGCGCCTGAAGCGCTCCAGCGAAACCTATATCCTCGATTATTGACTGCGTTGCATCGGGATCGGAGCGGACAATGGC
CAAGTTGGTCGGGTTCGGAG

Downstream 100 bases:

>100_bases
AACATTCCACAGCGCTCAAGTCTGCTCGATTTTCGAGCAATCCGGATTGGGGCCTGACAAGCGGGAGCCGCGACAAGGTG
CTCGCACCAGCGACCTTGGC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MVRHRNAIVTVTLRTMYRNSRYRGGRGDGGSGARSCHAAILALLAGSATGGCAALPASGPTGQAIVRSAKAPGAAMPYRL
VTLDSLSALPAPSAFAPGMPMRLAPPPTDLVGPADVLDIAIYEAGVALFSNEGGGNPMAAGGAEAAARSTRLPPVRVDDE
GRISLPFVGQVRAMGHTTAELQAIIRKALQPMSQDPQVMVSVQQSITNSVILSGEVARPGRLVLATNRETLAETIALAGG
QKGDAKDIVARLSRKDRTWEIRLNDLLADDRQDIPVYPGDRITLVSQPLTFAVMGAPNKVDHFRFPRSSMSLAEAVALAG
GANPDLGDAAAVFVFRFERREDGSEEPVVFHLDMLRPGAVFISQRFAMTDRDVLYIGNARANQPGKLIQLISQLFAPVVT
VERLAR

Sequences:

>Translated_406_residues
MVRHRNAIVTVTLRTMYRNSRYRGGRGDGGSGARSCHAAILALLAGSATGGCAALPASGPTGQAIVRSAKAPGAAMPYRL
VTLDSLSALPAPSAFAPGMPMRLAPPPTDLVGPADVLDIAIYEAGVALFSNEGGGNPMAAGGAEAAARSTRLPPVRVDDE
GRISLPFVGQVRAMGHTTAELQAIIRKALQPMSQDPQVMVSVQQSITNSVILSGEVARPGRLVLATNRETLAETIALAGG
QKGDAKDIVARLSRKDRTWEIRLNDLLADDRQDIPVYPGDRITLVSQPLTFAVMGAPNKVDHFRFPRSSMSLAEAVALAG
GANPDLGDAAAVFVFRFERREDGSEEPVVFHLDMLRPGAVFISQRFAMTDRDVLYIGNARANQPGKLIQLISQLFAPVVT
VERLAR
>Mature_406_residues
MVRHRNAIVTVTLRTMYRNSRYRGGRGDGGSGARSCHAAILALLAGSATGGCAALPASGPTGQAIVRSAKAPGAAMPYRL
VTLDSLSALPAPSAFAPGMPMRLAPPPTDLVGPADVLDIAIYEAGVALFSNEGGGNPMAAGGAEAAARSTRLPPVRVDDE
GRISLPFVGQVRAMGHTTAELQAIIRKALQPMSQDPQVMVSVQQSITNSVILSGEVARPGRLVLATNRETLAETIALAGG
QKGDAKDIVARLSRKDRTWEIRLNDLLADDRQDIPVYPGDRITLVSQPLTFAVMGAPNKVDHFRFPRSSMSLAEAVALAG
GANPDLGDAAAVFVFRFERREDGSEEPVVFHLDMLRPGAVFISQRFAMTDRDVLYIGNARANQPGKLIQLISQLFAPVVT
VERLAR

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=238, Percent_Identity=26.890756302521, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1788376, Length=363, Percent_Identity=25.068870523416, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 43001; Mature: 43001

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRHRNAIVTVTLRTMYRNSRYRGGRGDGGSGARSCHAAILALLAGSATGGCAALPASGP
CCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC
TGQAIVRSAKAPGAAMPYRLVTLDSLSALPAPSAFAPGMPMRLAPPPTDLVGPADVLDIA
CCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IYEAGVALFSNEGGGNPMAAGGAEAAARSTRLPPVRVDDEGRISLPFVGQVRAMGHTTAE
HHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCEECCCHHHHHHCCCCHHH
LQAIIRKALQPMSQDPQVMVSVQQSITNSVILSGEVARPGRLVLATNRETLAETIALAGG
HHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECHHHHHHHHHHCCC
QKGDAKDIVARLSRKDRTWEIRLNDLLADDRQDIPVYPGDRITLVSQPLTFAVMGAPNKV
CCCCHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCC
DHFRFPRSSMSLAEAVALAGGANPDLGDAAAVFVFRFERREDGSEEPVVFHLDMLRPGAV
HHCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCCCEEEEEECCCCCHH
FISQRFAMTDRDVLYIGNARANQPGKLIQLISQLFAPVVTVERLAR
HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRHRNAIVTVTLRTMYRNSRYRGGRGDGGSGARSCHAAILALLAGSATGGCAALPASGP
CCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCC
TGQAIVRSAKAPGAAMPYRLVTLDSLSALPAPSAFAPGMPMRLAPPPTDLVGPADVLDIA
CCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
IYEAGVALFSNEGGGNPMAAGGAEAAARSTRLPPVRVDDEGRISLPFVGQVRAMGHTTAE
HHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCEECCCHHHHHHCCCCHHH
LQAIIRKALQPMSQDPQVMVSVQQSITNSVILSGEVARPGRLVLATNRETLAETIALAGG
HHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECHHHHHHHHHHCCC
QKGDAKDIVARLSRKDRTWEIRLNDLLADDRQDIPVYPGDRITLVSQPLTFAVMGAPNKV
CCCCHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCC
DHFRFPRSSMSLAEAVALAGGANPDLGDAAAVFVFRFERREDGSEEPVVFHLDMLRPGAV
HHCCCCCHHHHHHHHHHHCCCCCCCCCHHHEEEEEEEECCCCCCCCCEEEEEECCCCCHH
FISQRFAMTDRDVLYIGNARANQPGKLIQLISQLFAPVVTVERLAR
HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]