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The map label for this gene is yrbH [C]

Identifier: 87198751

GI number: 87198751

Start: 768182

End: 769204

Strand: Reverse

Name: yrbH [C]

Synonym: Saro_0727

Alternate gene names: 87198751

Gene position: 769204-768182 (Counterclockwise)

Preceding gene: 87198752

Following gene: 87198750

Centisome position: 21.6

GC content: 67.06

Gene sequence:

>1023_bases
ATGAAAACAAGGTTCGACAGCGATCCCTTCGAGCCGGTCGCGACAGAGGCGGTCACCCGATCGATTCCGCCCCGCAAGAT
CGGTCGTGAGGTCGTGATCGCGGAAAGCGCAGGGCTTGCTGCACTTGCCGAGGCGCTGGATGCCTCGTTCGACGCTGCGG
TGAGTCTACTGCATTCCGGCGGCGGTCGCGTGTTCGTGAGCGGGGTGGGCAAATCGGGCCACGTCGCCCGAAAGATAGCC
AGCACCTTATCGTCCACCGGTCGTCCGGCGTGCTTCATTCATCCGGTGGAGGCCATGCATGGCGATCTTGGAATGCTGTG
CCCCGGGGACGTGCTGATCGTGCTGTCCAATTCGGGAGCGTCGATGGAACTGCGCGGCCTAGTCGACCATGCGCAGCGTC
TTTCGGCAAGGATCGTGGCGATCGGGGCCCGGCCGGACTCTCCGCTGATGCGGGTGGCGGACATCGCGCTCGTCATTCCC
GATGGCCCCGAAGCATGCCCGGTCAACATTGCGCCAACCACATCGACCACGATGATGCTGGCACTGGGCGATGCGCTTGC
CGTGGCTGTGATGAGCGCGCGCGGCATCGGGGTAGAGCGCATCAGGCTGCTCCACCCGGGAGGCCCGATCGGAGAGCGGC
TCCGCGTCGCGGAGGACGTGATGCGAACCGACGCCCTGCCGCTGGTGGGGGTCGAGGACCCGATGCCCGAAGTGCTGTTG
TGCATGGCGCGATCAGGCCTCGGAATCGCGGGCGTGGTCGCCTTGGGTGGAGGACTGGTCGGCGTGATCGAGGCGGACAG
GCTGCCAGCCGTGGCCCGCGACCTCGCCGGGGAGCGGGCCGGGTTTTTGATGAACCGCCACGCCTGGGTCGCAAGGCGGG
AAACGCCCTTGGACGAAATCGCCCGGAACCTGGGTGTCGGCGGGAGCGATGCGGCCCTCGTGATTGCGGGCGAGAACGAT
CGCAGGCCGATCGGCGTCGTCAGCGCTCGGAACCTCGGCACGTCGGGAGCGTGGCCGGCATGA

Upstream 100 bases:

>100_bases
TGCAACTGGATATGCGCCCGTTTCCGAACAGCCGGTGCTTGCCGAAAGGAAGGGGTGAAGCCTCACATCAGTTTGGGTGC
AGCTTGGAACGGAACAACAA

Downstream 100 bases:

>100_bases
ACGCGGGATTCGAACGAATGAAGCGGCGGCGGCGGCCCTTCCTCATTTCGGGCCCCTGCGTCATAGAGGGGCTGGACCTG
TGTCTTGGCATGGCGGAGGC

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKTRFDSDPFEPVATEAVTRSIPPRKIGREVVIAESAGLAALAEALDASFDAAVSLLHSGGGRVFVSGVGKSGHVARKIA
STLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIP
DGPEACPVNIAPTTSTTMMLALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRTDALPLVGVEDPMPEVLL
CMARSGLGIAGVVALGGGLVGVIEADRLPAVARDLAGERAGFLMNRHAWVARRETPLDEIARNLGVGGSDAALVIAGEND
RRPIGVVSARNLGTSGAWPA

Sequences:

>Translated_340_residues
MKTRFDSDPFEPVATEAVTRSIPPRKIGREVVIAESAGLAALAEALDASFDAAVSLLHSGGGRVFVSGVGKSGHVARKIA
STLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIP
DGPEACPVNIAPTTSTTMMLALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRTDALPLVGVEDPMPEVLL
CMARSGLGIAGVVALGGGLVGVIEADRLPAVARDLAGERAGFLMNRHAWVARRETPLDEIARNLGVGGSDAALVIAGEND
RRPIGVVSARNLGTSGAWPA
>Mature_340_residues
MKTRFDSDPFEPVATEAVTRSIPPRKIGREVVIAESAGLAALAEALDASFDAAVSLLHSGGGRVFVSGVGKSGHVARKIA
STLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIP
DGPEACPVNIAPTTSTTMMLALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRTDALPLVGVEDPMPEVLL
CMARSGLGIAGVVALGGGLVGVIEADRLPAVARDLAGERAGFLMNRHAWVARRETPLDEIARNLGVGGSDAALVIAGEND
RRPIGVVSARNLGTSGAWPA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=228, Percent_Identity=42.9824561403509, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI87082151, Length=227, Percent_Identity=41.8502202643172, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35069; Mature: 35069

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRFDSDPFEPVATEAVTRSIPPRKIGREVVIAESAGLAALAEALDASFDAAVSLLHSG
CCCCCCCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCC
GGRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGA
CCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEECCCC
SMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPVNIAPTTSTTMML
CEEHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCEEEE
ALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRTDALPLVGVEDPMPEVLL
HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH
CMARSGLGIAGVVALGGGLVGVIEADRLPAVARDLAGERAGFLMNRHAWVARRETPLDEI
HHHHCCCCEEEHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHEEECCCEEEECCCCHHHH
ARNLGVGGSDAALVIAGENDRRPIGVVSARNLGTSGAWPA
HHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKTRFDSDPFEPVATEAVTRSIPPRKIGREVVIAESAGLAALAEALDASFDAAVSLLHSG
CCCCCCCCCCCHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCC
GGRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCPGDVLIVLSNSGA
CCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCEEEEEECCCC
SMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPVNIAPTTSTTMML
CEEHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCEEEE
ALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRTDALPLVGVEDPMPEVLL
HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHH
CMARSGLGIAGVVALGGGLVGVIEADRLPAVARDLAGERAGFLMNRHAWVARRETPLDEI
HHHHCCCCEEEHHHHCCCEEEEEECCCCHHHHHHHCCCHHHHEEECCCEEEECCCCHHHH
ARNLGVGGSDAALVIAGENDRRPIGVVSARNLGTSGAWPA
HHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]