Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198703

Identifier: 87198703

GI number: 87198703

Start: 715567

End: 716622

Strand: Reverse

Name: 87198703

Synonym: Saro_0679

Alternate gene names: NA

Gene position: 716622-715567 (Counterclockwise)

Preceding gene: 87198704

Following gene: 87198702

Centisome position: 20.12

GC content: 68.47

Gene sequence:

>1056_bases
GTGACCACTTCGCTGCTGGACACGTTCGTCCGGCTGATCGCCAATACCGGGCCGATCAGCATGGCGCACTACATGGCCGA
ATCGAATGCACGGTACTACGCCGCCCAGGACCCGTTCGGGGTCGCCGGCGATTTCATCACCGCGCCCGAGATCAGCCAGA
TGTTCGGCGAACTGATAGGCCTGTACCTGGCCGACATCTGGATCCGCGCCGGACGTCCGGAGCCGGTCCACTATGTCGAG
CTTGGACCGGGCCGGGGCACGCTGGCACGCGATGCGCTGCGCGCTGCGCGACGCTACGGTCTCGTTCCGCGCACGCACTT
CGTGGAAACCAGCACGGCGCTCAAGGCGCTCCAGCTAGACATGCATCCGGATGCGCGCTGGCACGCCGACCTTTCGACGC
TTCCCGTCGACGGGCCGCTGCTGATAGTGGCCAACGAATTCCTCGATGCGCTGCCGGTCCGCCAGATGGTGAAGACCGCA
GCCGGGTGGCGCGAGCGCATGGTCGGGCTCGACGACGGGCGCCTCGTGCCGGTCTCGGGCAGTGCGCCGATGGATGCGGC
CGTTCCTGCGGGTCGGCAGGAAGCGCCCGAAGGCGCGATCCTCGAGACTTCGCCGGCCTGCGCCGCCGTAATCTACGAAG
TGGCCGGACGGCTGGCCGCGCAAGGAGGCACGGCGCTGTTCATCGACTATGGACATGCCGAGCCGCGCCTTGGCTCCTCG
CTCCAGGCGGTCCGAGCGCACCGCAAGGTCGATGTCTTTGCCGCCCCCGGCGAGGCCGATCTGACGGCACATGTCGACTT
TTCGGCGCTGGCACCCATCGCGCAATCGCGCGAAGTGCGCTGGCTGGGCACGGTCGAGCAGGGCGACTGGTTGCGGGCGC
TGGGGATCGAGGCCCGCGCGGAAGCGCTGGCGACGTTCTCACCGCCTCATGCGCAGGCGATCCACGCCGCACGCGACCGG
CTGATCGACGAGGGCCAGATGGGCTCGCTGTTCAAGGTCATGGGACTCGCCGGGCCCACCTGGCCCGACGGCTCGGGATT
CCAGCGAATCTCCTGA

Upstream 100 bases:

>100_bases
TGGGCCAGTGGCTGACCATACCGATGATGGCCATCGGCCTAGGCTTCCTGCTCAACGCGGTCGTGCGCAAGCCGCTGTCG
ACGACGGGAGCCGCGCCCGC

Downstream 100 bases:

>100_bases
TCGGCCGCGTAACCCCGAGTCTTCCTTGCGAAGCCGCAGGATTCCGTGCCTTTTCCCATACCAAAATGCCTGTTGGCAAA
GCCGCCGCTTTGCGTCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTTSLLDTFVRLIANTGPISMAHYMAESNARYYAAQDPFGVAGDFITAPEISQMFGELIGLYLADIWIRAGRPEPVHYVE
LGPGRGTLARDALRAARRYGLVPRTHFVETSTALKALQLDMHPDARWHADLSTLPVDGPLLIVANEFLDALPVRQMVKTA
AGWRERMVGLDDGRLVPVSGSAPMDAAVPAGRQEAPEGAILETSPACAAVIYEVAGRLAAQGGTALFIDYGHAEPRLGSS
LQAVRAHRKVDVFAAPGEADLTAHVDFSALAPIAQSREVRWLGTVEQGDWLRALGIEARAEALATFSPPHAQAIHAARDR
LIDEGQMGSLFKVMGLAGPTWPDGSGFQRIS

Sequences:

>Translated_351_residues
MTTSLLDTFVRLIANTGPISMAHYMAESNARYYAAQDPFGVAGDFITAPEISQMFGELIGLYLADIWIRAGRPEPVHYVE
LGPGRGTLARDALRAARRYGLVPRTHFVETSTALKALQLDMHPDARWHADLSTLPVDGPLLIVANEFLDALPVRQMVKTA
AGWRERMVGLDDGRLVPVSGSAPMDAAVPAGRQEAPEGAILETSPACAAVIYEVAGRLAAQGGTALFIDYGHAEPRLGSS
LQAVRAHRKVDVFAAPGEADLTAHVDFSALAPIAQSREVRWLGTVEQGDWLRALGIEARAEALATFSPPHAQAIHAARDR
LIDEGQMGSLFKVMGLAGPTWPDGSGFQRIS
>Mature_350_residues
TTSLLDTFVRLIANTGPISMAHYMAESNARYYAAQDPFGVAGDFITAPEISQMFGELIGLYLADIWIRAGRPEPVHYVEL
GPGRGTLARDALRAARRYGLVPRTHFVETSTALKALQLDMHPDARWHADLSTLPVDGPLLIVANEFLDALPVRQMVKTAA
GWRERMVGLDDGRLVPVSGSAPMDAAVPAGRQEAPEGAILETSPACAAVIYEVAGRLAAQGGTALFIDYGHAEPRLGSSL
QAVRAHRKVDVFAAPGEADLTAHVDFSALAPIAQSREVRWLGTVEQGDWLRALGIEARAEALATFSPPHAQAIHAARDRL
IDEGQMGSLFKVMGLAGPTWPDGSGFQRIS

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=388, Percent_Identity=34.2783505154639, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI145701028, Length=355, Percent_Identity=28.169014084507, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193211224, Length=375, Percent_Identity=31.7333333333333, Blast_Score=171, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24645885, Length=364, Percent_Identity=35.7142857142857, Blast_Score=178, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37692; Mature: 37561

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSLLDTFVRLIANTGPISMAHYMAESNARYYAAQDPFGVAGDFITAPEISQMFGELIG
CCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LYLADIWIRAGRPEPVHYVELGPGRGTLARDALRAARRYGLVPRTHFVETSTALKALQLD
HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEC
MHPDARWHADLSTLPVDGPLLIVANEFLDALPVRQMVKTAAGWRERMVGLDDGRLVPVSG
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
SAPMDAAVPAGRQEAPEGAILETSPACAAVIYEVAGRLAAQGGTALFIDYGHAEPRLGSS
CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHH
LQAVRAHRKVDVFAAPGEADLTAHVDFSALAPIAQSREVRWLGTVEQGDWLRALGIEARA
HHHHHHHCCEEEEECCCCCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHH
EALATFSPPHAQAIHAARDRLIDEGQMGSLFKVMGLAGPTWPDGSGFQRIS
HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTSLLDTFVRLIANTGPISMAHYMAESNARYYAAQDPFGVAGDFITAPEISQMFGELIG
CHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
LYLADIWIRAGRPEPVHYVELGPGRGTLARDALRAARRYGLVPRTHFVETSTALKALQLD
HHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEC
MHPDARWHADLSTLPVDGPLLIVANEFLDALPVRQMVKTAAGWRERMVGLDDGRLVPVSG
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
SAPMDAAVPAGRQEAPEGAILETSPACAAVIYEVAGRLAAQGGTALFIDYGHAEPRLGSS
CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHH
LQAVRAHRKVDVFAAPGEADLTAHVDFSALAPIAQSREVRWLGTVEQGDWLRALGIEARA
HHHHHHHCCEEEEECCCCCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHH
EALATFSPPHAQAIHAARDRLIDEGQMGSLFKVMGLAGPTWPDGSGFQRIS
HHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA