Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is lgt [H]

Identifier: 87198704

GI number: 87198704

Start: 716619

End: 717518

Strand: Reverse

Name: lgt [H]

Synonym: Saro_0680

Alternate gene names: 87198704

Gene position: 717518-716619 (Counterclockwise)

Preceding gene: 87198721

Following gene: 87198703

Centisome position: 20.15

GC content: 66.89

Gene sequence:

>900_bases
TTGCTGTCACTACTGTCAACAGCAACCGCGCTTGCCGTAACGTCCGCGTCTGCGGCGGGCGCTGGCGGGCCGATTCGCTG
GGAAGACCTGGGCGTTTCCCCGATCGCGCTCGACCTCGGCTTCTTCGCCCTGAAATGGTACTCGCTCGCCTACCTTGCCG
GCATCATCCTCGGCTACTGGCACCTGTCAAAGATGATCCGCCAGCCGGGCGCGCCGATGGCACAACGCCACGCGGACGAC
CTGTTCTTCTACGCGACGCTCGGCATCATCCTGGGCGGGCGGCTCGGCTATGCGATCTTCTATGCCCCCGAACTGCTCAG
CCACCCGCAGAACCTGGTCAAGCTGTGGGAAGGCGGCATGAGCTTCCACGGGGGCCTGATGGGCACTGTGCTGGCAATCG
CGTGGGTGGCATGGCGGGGCCGGCTCAACTTCGTGCGAGTGTGCGACTACATCGCGGTCTGCGTGCCCTTCGGCCTGCTC
TTCGGGCGCCTCGCCAATTTCATGAACGGCGAGCTTTGGGGCCGCGAAGCGGGTCCGGACGTGCCGTGGGCGATGGTCTT
TCCCGGCGGCGGCCCGATCGCGCGGCACCCAAGCCAGCTCTACGAGGCCGGGCTCGAAGGGCTTGTGCTGATGGTCGTCC
TGCTCCTCCTGTTCTGGAAGTCCAGAGCGCGCTGGCGGCCGGGCCTCCTCGTCGGCACGTTCGCGCTCGGGTATGGGCTG
GCGCGCTTCACGGTCGAGTTCTTCCGCGAACCCGATGCCCAGCTTCTCGAGTTCGCGCAGCGCTCGGGCCTTTCGATGGG
CCAGTGGCTGACCATACCGATGATGGCCATCGGCCTAGGCTTCCTGCTCAACGCGGTCGTGCGCAAGCCGCTGTCGACGA
CGGGAGCCGCGCCCGCGTGA

Upstream 100 bases:

>100_bases
TTGCCTGGGGGCTTTGCCCTGTGCCAATACGGCGCCCTCGAGGGCGTGCCGTCAAGGCCGGAATCCTGCCCTTTCCGGAA
AGATGTAGGGAGTTCGCAAC

Downstream 100 bases:

>100_bases
CCACTTCGCTGCTGGACACGTTCGTCCGGCTGATCGCCAATACCGGGCCGATCAGCATGGCGCACTACATGGCCGAATCG
AATGCACGGTACTACGCCGC

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MLSLLSTATALAVTSASAAGAGGPIRWEDLGVSPIALDLGFFALKWYSLAYLAGIILGYWHLSKMIRQPGAPMAQRHADD
LFFYATLGIILGGRLGYAIFYAPELLSHPQNLVKLWEGGMSFHGGLMGTVLAIAWVAWRGRLNFVRVCDYIAVCVPFGLL
FGRLANFMNGELWGREAGPDVPWAMVFPGGGPIARHPSQLYEAGLEGLVLMVVLLLLFWKSRARWRPGLLVGTFALGYGL
ARFTVEFFREPDAQLLEFAQRSGLSMGQWLTIPMMAIGLGFLLNAVVRKPLSTTGAAPA

Sequences:

>Translated_299_residues
MLSLLSTATALAVTSASAAGAGGPIRWEDLGVSPIALDLGFFALKWYSLAYLAGIILGYWHLSKMIRQPGAPMAQRHADD
LFFYATLGIILGGRLGYAIFYAPELLSHPQNLVKLWEGGMSFHGGLMGTVLAIAWVAWRGRLNFVRVCDYIAVCVPFGLL
FGRLANFMNGELWGREAGPDVPWAMVFPGGGPIARHPSQLYEAGLEGLVLMVVLLLLFWKSRARWRPGLLVGTFALGYGL
ARFTVEFFREPDAQLLEFAQRSGLSMGQWLTIPMMAIGLGFLLNAVVRKPLSTTGAAPA
>Mature_299_residues
MLSLLSTATALAVTSASAAGAGGPIRWEDLGVSPIALDLGFFALKWYSLAYLAGIILGYWHLSKMIRQPGAPMAQRHADD
LFFYATLGIILGGRLGYAIFYAPELLSHPQNLVKLWEGGMSFHGGLMGTVLAIAWVAWRGRLNFVRVCDYIAVCVPFGLL
FGRLANFMNGELWGREAGPDVPWAMVFPGGGPIARHPSQLYEAGLEGLVLMVVLLLLFWKSRARWRPGLLVGTFALGYGL
ARFTVEFFREPDAQLLEFAQRSGLSMGQWLTIPMMAIGLGFLLNAVVRKPLSTTGAAPA

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family [H]

Homologues:

Organism=Escherichia coli, GI1789192, Length=280, Percent_Identity=41.4285714285714, Blast_Score=200, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001640 [H]

Pfam domain/function: PF01790 LGT [H]

EC number: 2.4.99.- [C]

Molecular weight: Translated: 32505; Mature: 32505

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLLSTATALAVTSASAAGAGGPIRWEDLGVSPIALDLGFFALKWYSLAYLAGIILGYW
CCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSKMIRQPGAPMAQRHADDLFFYATLGIILGGRLGYAIFYAPELLSHPQNLVKLWEGGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHCCC
SFHGGLMGTVLAIAWVAWRGRLNFVRVCDYIAVCVPFGLLFGRLANFMNGELWGREAGPD
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VPWAMVFPGGGPIARHPSQLYEAGLEGLVLMVVLLLLFWKSRARWRPGLLVGTFALGYGL
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ARFTVEFFREPDAQLLEFAQRSGLSMGQWLTIPMMAIGLGFLLNAVVRKPLSTTGAAPA
HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSLLSTATALAVTSASAAGAGGPIRWEDLGVSPIALDLGFFALKWYSLAYLAGIILGYW
CCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLSKMIRQPGAPMAQRHADDLFFYATLGIILGGRLGYAIFYAPELLSHPQNLVKLWEGGM
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHCCC
SFHGGLMGTVLAIAWVAWRGRLNFVRVCDYIAVCVPFGLLFGRLANFMNGELWGREAGPD
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VPWAMVFPGGGPIARHPSQLYEAGLEGLVLMVVLLLLFWKSRARWRPGLLVGTFALGYGL
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ARFTVEFFREPDAQLLEFAQRSGLSMGQWLTIPMMAIGLGFLLNAVVRKPLSTTGAAPA
HHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA