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The map label for this gene is fbcH [H]

Identifier: 87198700

GI number: 87198700

Start: 712582

End: 713397

Strand: Reverse

Name: fbcH [H]

Synonym: Saro_0676

Alternate gene names: 87198700

Gene position: 713397-712582 (Counterclockwise)

Preceding gene: 87198701

Following gene: 87198699

Centisome position: 20.03

GC content: 64.95

Gene sequence:

>816_bases
ATGGTCCGTCTTTTTGGCCCCCTCGTCGGCCTCTTCTTCGCGGTCGCGCTGCTCTGGTCGTTCGGTAACGGCGCCTATGT
CGCGATCACGGAACCCGCCGCTCCCACCGCGGAAAGCGTGTTCCACAAGCATCCCAAGGAGCTGGATCTTGCCAGCAACG
GCGCCTTTGGCCGTTTTGACAAGCAGCAGCTCCAGCGCGGCTTCCAGGTCTACAAGGAAGTCTGCGCCACCTGCCACTCG
CTCAAGCAGATCGCTTTCCGCGATCTGGCGGCGCTCGGGTATTCCGAAGCCGAAGTGAAGGCGATCGCCAAGGGCTGGCC
GACCAAGGCCGCCACGTTCAACCCGGTCACCGGAGACCGTGGCGAGCGTGACAACATCCCGTCCGACCGCATCCCCGCGG
TCTACTATGCAGGCCAGGGCGTGCCGCCCGACCTCTCGCTGATGACCAAGGCCCGTCACGACGGCGGCGCCTACGTCTAT
TCGCTGCTGACCGGCTACGCGGAACAGCCCGCCGAACTGCTCAAGCAGTTCCCGGATGCCAAGACGCCGGACGGCCTGCA
CTACAACCCGTACTTCGCGAACCTCAACCTCGCGATGCCGGCACCGCTGACCACCGATGGTCAGGTGACCTACTCGGACG
GCACCAAGGCCTCCGTCGACCAGATGGCAAAGGACGTCTCGGCGTTCCTCGTCTGGACCGCGGAACCCAAGCTGGACAAG
CGGAAGCAGACCGGCTGGGCCGTCCTCGGCTTCCTCCTGGTCGCCACGGTCCTCGCCTACCTCGCCAAGAAGAACGTCTG
GGCCGACAAGCACTGA

Upstream 100 bases:

>100_bases
CTCGATCACCGAAGCCGTCCTGGGCAAGGATGAGAGCGCGGTGCTCAACGCCAACCCCGCTGCCGCCTGACAGCACGAAG
CGTAAGAGAAAGAGAACCCT

Downstream 100 bases:

>100_bases
GTTCTACAGAAGCGAAACGAACAAAGGCCACCGGAAACGGTGGCCTTTTTCGTATCCGGCGATAGCATCCGCGCACGATG
ACCACCGACGATCTCAAGCG

Product: cytochrome c1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVRLFGPLVGLFFAVALLWSFGNGAYVAITEPAAPTAESVFHKHPKELDLASNGAFGRFDKQQLQRGFQVYKEVCATCHS
LKQIAFRDLAALGYSEAEVKAIAKGWPTKAATFNPVTGDRGERDNIPSDRIPAVYYAGQGVPPDLSLMTKARHDGGAYVY
SLLTGYAEQPAELLKQFPDAKTPDGLHYNPYFANLNLAMPAPLTTDGQVTYSDGTKASVDQMAKDVSAFLVWTAEPKLDK
RKQTGWAVLGFLLVATVLAYLAKKNVWADKH

Sequences:

>Translated_271_residues
MVRLFGPLVGLFFAVALLWSFGNGAYVAITEPAAPTAESVFHKHPKELDLASNGAFGRFDKQQLQRGFQVYKEVCATCHS
LKQIAFRDLAALGYSEAEVKAIAKGWPTKAATFNPVTGDRGERDNIPSDRIPAVYYAGQGVPPDLSLMTKARHDGGAYVY
SLLTGYAEQPAELLKQFPDAKTPDGLHYNPYFANLNLAMPAPLTTDGQVTYSDGTKASVDQMAKDVSAFLVWTAEPKLDK
RKQTGWAVLGFLLVATVLAYLAKKNVWADKH
>Mature_271_residues
MVRLFGPLVGLFFAVALLWSFGNGAYVAITEPAAPTAESVFHKHPKELDLASNGAFGRFDKQQLQRGFQVYKEVCATCHS
LKQIAFRDLAALGYSEAEVKAIAKGWPTKAATFNPVTGDRGERDNIPSDRIPAVYYAGQGVPPDLSLMTKARHDGGAYVY
SLLTGYAEQPAELLKQFPDAKTPDGLHYNPYFANLNLAMPAPLTTDGQVTYSDGTKASVDQMAKDVSAFLVWTAEPKLDK
RKQTGWAVLGFLLVATVLAYLAKKNVWADKH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI21359867, Length=231, Percent_Identity=36.3636363636364, Blast_Score=139, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17506225, Length=259, Percent_Identity=36.6795366795367, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324639, Length=229, Percent_Identity=40.174672489083, Blast_Score=155, Evalue=7e-39,
Organism=Drosophila melanogaster, GI24658292, Length=223, Percent_Identity=38.1165919282511, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI21358225, Length=237, Percent_Identity=35.8649789029536, Blast_Score=118, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N; PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 29589; Mature: 29589

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLFGPLVGLFFAVALLWSFGNGAYVAITEPAAPTAESVFHKHPKELDLASNGAFGRFD
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
KQQLQRGFQVYKEVCATCHSLKQIAFRDLAALGYSEAEVKAIAKGWPTKAATFNPVTGDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCC
GERDNIPSDRIPAVYYAGQGVPPDLSLMTKARHDGGAYVYSLLTGYAEQPAELLKQFPDA
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCC
KTPDGLHYNPYFANLNLAMPAPLTTDGQVTYSDGTKASVDQMAKDVSAFLVWTAEPKLDK
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCHH
RKQTGWAVLGFLLVATVLAYLAKKNVWADKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVRLFGPLVGLFFAVALLWSFGNGAYVAITEPAAPTAESVFHKHPKELDLASNGAFGRFD
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
KQQLQRGFQVYKEVCATCHSLKQIAFRDLAALGYSEAEVKAIAKGWPTKAATFNPVTGDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCC
GERDNIPSDRIPAVYYAGQGVPPDLSLMTKARHDGGAYVYSLLTGYAEQPAELLKQFPDA
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCC
KTPDGLHYNPYFANLNLAMPAPLTTDGQVTYSDGTKASVDQMAKDVSAFLVWTAEPKLDK
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCHH
RKQTGWAVLGFLLVATVLAYLAKKNVWADKH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2541921; 12597275 [H]