| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is apt
Identifier: 87198699
GI number: 87198699
Start: 711968
End: 712504
Strand: Reverse
Name: apt
Synonym: Saro_0675
Alternate gene names: 87198699
Gene position: 712504-711968 (Counterclockwise)
Preceding gene: 87198700
Following gene: 87198694
Centisome position: 20.01
GC content: 65.74
Gene sequence:
>537_bases ATGACCACCGACGATCTCAAGCGACTTGTCCGTACCGTCCCGGATTTCCCCTCCCCCGGAATCCTGTTCCGCGACATCAC GACCCTGATCGCGCATGGCGAAGGTCTCTCGGCCTGCATCGACCACCTCGCCCACAAGGCACGCGCGGCCGGGGCACAGG CCGTTGCGGGAATGGAGGCGCGCGGCTTCATCTTCGGCGCGGCGGTGGCTGCAAGGATGGGACTGGGCTTCATTCCGGTG CGCAAGCCGGGCAAGCTTCCGGTCAAGACCATCGGCATCGACTATGCACTGGAATACGGGCGCGACCGGCTGGAGATCGA TCCCACCGCCATTCGCGAAGGCCAGCGCGTTGTGATCGTCGACGACCTCATCGCGACCGGCGGCACTGCCCTGGCCGCGG CCGAACTGCTCCGCATGGCGGGCGCACATGTCACGCACGCCCTCTTCGTGATCGACCTGCCCGAACTGCATGGCGCCGAA CGACTTCGCGGTGCTGGTTTGACCGTCGAAGCGCTCATGGACTTTCCAGGGCACTGA
Upstream 100 bases:
>100_bases ACGTCTGGGCCGACAAGCACTGAGTTCTACAGAAGCGAAACGAACAAAGGCCACCGGAAACGGTGGCCTTTTTCGTATCC GGCGATAGCATCCGCGCACG
Downstream 100 bases:
>100_bases AACGCGAAAGGGCGGCCCGATGGACCGCCCTTCCTGTCTTTAAACGTCGCAAGCCTCAATCCACGAGCATCAACGCGTCG AGCGCAACCACGCCTTCGCC
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTTDDLKRLVRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEARGFIFGAAVAARMGLGFIPV RKPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIVDDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAE RLRGAGLTVEALMDFPGH
Sequences:
>Translated_178_residues MTTDDLKRLVRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEARGFIFGAAVAARMGLGFIPV RKPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIVDDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAE RLRGAGLTVEALMDFPGH >Mature_177_residues TTDDLKRLVRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEARGFIFGAAVAARMGLGFIPVR KPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIVDDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAER LRGAGLTVEALMDFPGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=160, Percent_Identity=43.125, Blast_Score=132, Evalue=1e-31, Organism=Homo sapiens, GI71773201, Length=125, Percent_Identity=44, Blast_Score=111, Evalue=3e-25, Organism=Escherichia coli, GI1786675, Length=173, Percent_Identity=49.7109826589595, Blast_Score=174, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17509087, Length=167, Percent_Identity=43.7125748502994, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323619, Length=170, Percent_Identity=39.4117647058824, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6320649, Length=169, Percent_Identity=35.5029585798817, Blast_Score=91, Evalue=7e-20, Organism=Drosophila melanogaster, GI17136334, Length=168, Percent_Identity=40.4761904761905, Blast_Score=125, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_NOVAD (Q2GAK1)
Other databases:
- EMBL: CP000248 - RefSeq: YP_495956.1 - HSSP: P07741 - ProteinModelPortal: Q2GAK1 - SMR: Q2GAK1 - STRING: Q2GAK1 - GeneID: 3918100 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_0675 - NMPDR: fig|48935.1.peg.1914 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - PhylomeDB: Q2GAK1 - ProtClustDB: PRK02304 - BioCyc: NARO279238:SARO_0675-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 18865; Mature: 18734
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDDLKRLVRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEA CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCC RGFIFGAAVAARMGLGFIPVRKPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIV CHHHHHHHHHHHHCCCCEECCCCCCCCEEEECHHHHHHCCCCCEEECHHHHHCCCEEEEE DDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAERLRGAGLTVEALMDFPGH ECHHHCCCHHHHHHHHHHHHCHHHHHEEEEEECCCCCCHHHHCCCCCCHHHHHCCCCC >Mature Secondary Structure TTDDLKRLVRTVPDFPSPGILFRDITTLIAHGEGLSACIDHLAHKARAAGAQAVAGMEA CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCC RGFIFGAAVAARMGLGFIPVRKPGKLPVKTIGIDYALEYGRDRLEIDPTAIREGQRVVIV CHHHHHHHHHHHHCCCCEECCCCCCCCEEEECHHHHHHCCCCCEEECHHHHHCCCEEEEE DDLIATGGTALAAAELLRMAGAHVTHALFVIDLPELHGAERLRGAGLTVEALMDFPGH ECHHHCCCHHHHHHHHHHHHCHHHHHEEEEEECCCCCCHHHHCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA