| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198650
Identifier: 87198650
GI number: 87198650
Start: 671305
End: 672378
Strand: Reverse
Name: 87198650
Synonym: Saro_0626
Alternate gene names: NA
Gene position: 672378-671305 (Counterclockwise)
Preceding gene: 87198651
Following gene: 87198649
Centisome position: 18.88
GC content: 67.23
Gene sequence:
>1074_bases ATGATCGCTCCCGTCCAGAACCGCGTACCATGCGGCCCGCAGGTTGGCGCGCCGCCCAGCCTGGAACAGATTCCCGTCGA TCGACTGGCGGTTGACCCAACCTATCAGCGCGCGACGGACAGCCCCGCCTCACGCCGGATCATCGTCGGCATGGTCAAGC GCTGGGATTGGTCGCTTTGCCAGCCCCTCGTCGTATCGCGCAGGAGCGATGGTAGCCTGCTGATCCTCGACGGTCAGCAC CGGCATGCCGGCGCAATCGAGCGGGGCGATATTCATTTCCTGCCGTGCGTCATTCTTTCCGCGTTGGGCTTGGAAGGAGA GGCAAAGACGTTCGTCGAGCTCAACACCAAGCGCCAGCGACTTACCCAGGCCGAAGTGTTCCATGGCATGCTCGCTGCCG GCGACCCGCAGGCAAAGGCCGTGGCGGATCTGATCGCGCAGACCGGTTGGACCGTCCGCAAGGGTAGCAACACGGCCGCA TACAAGGCGGGCGATCTCGAATGCGCCCCGATGCTGGTCAAGGTCTACGCCTTCAAGGGTGAAGCTCCCGTCCAGTTCGC GCTGACCGCCCTGCGCGCCGCCTATCCGGACACGCCCGTACGGCAGTCCGCAACCTTGCTCAAAGCGCTCGTCGACGTGT TCGACACGATGCTCGACGATCCGCTGCCCACTACCAAACTGATTGCGGCGATCGGCGCCGTGCAACCCGACACCTGGATC AGCCGCGGCATCATCCACCGCGAATCCTTCCCAGCCATGTCCCATATCGCCGCGATCGCCGCCACCATGGTGGCTGCGGC CAAGGGACAGGAGCCGCCGAGCGCCCGCCCCCTCCCGACGAAGGCCACCCCTGTTGCGCCAGTGGCAGCGCCCCGCACCG CGCCAACGCCTGCGCCGGCACCGAAGCCCGCCACGCTCGCACCAGCCCCGCGCCCGCGCGCTGCCACCAAAAAGCTGGCC ACCGTCTTCGGCACCAGCGGCAAGGGCTGGTGCGAACAGTGCGACCAGCTTGTCAGCCGCGAGAAGGCCCGCGCCTGCAC CGACCGCTTCTGCACCGCCCGCGCAGACGCCTGA
Upstream 100 bases:
>100_bases GCGCCTGCATTCTCGCGGCCGAACACGAGGATCAGACCTCGCCCGAGGCGATCAACCAGATGCTCGGCGCGCTCACCCGC TTTCTCGAGGTCTTCGAACC
Downstream 100 bases:
>100_bases AACCAGCGAAAGGCAAATCCATGTCGATCACTACCCTGCCCCTTAGCTCGCTCATCCTGTCCAAGCTCAACGTCCGCCAT ACGGAACGCGACGCCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MIAPVQNRVPCGPQVGAPPSLEQIPVDRLAVDPTYQRATDSPASRRIIVGMVKRWDWSLCQPLVVSRRSDGSLLILDGQH RHAGAIERGDIHFLPCVILSALGLEGEAKTFVELNTKRQRLTQAEVFHGMLAAGDPQAKAVADLIAQTGWTVRKGSNTAA YKAGDLECAPMLVKVYAFKGEAPVQFALTALRAAYPDTPVRQSATLLKALVDVFDTMLDDPLPTTKLIAAIGAVQPDTWI SRGIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPAPKPATLAPAPRPRAATKKLA TVFGTSGKGWCEQCDQLVSREKARACTDRFCTARADA
Sequences:
>Translated_357_residues MIAPVQNRVPCGPQVGAPPSLEQIPVDRLAVDPTYQRATDSPASRRIIVGMVKRWDWSLCQPLVVSRRSDGSLLILDGQH RHAGAIERGDIHFLPCVILSALGLEGEAKTFVELNTKRQRLTQAEVFHGMLAAGDPQAKAVADLIAQTGWTVRKGSNTAA YKAGDLECAPMLVKVYAFKGEAPVQFALTALRAAYPDTPVRQSATLLKALVDVFDTMLDDPLPTTKLIAAIGAVQPDTWI SRGIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPAPKPATLAPAPRPRAATKKLA TVFGTSGKGWCEQCDQLVSREKARACTDRFCTARADA >Mature_357_residues MIAPVQNRVPCGPQVGAPPSLEQIPVDRLAVDPTYQRATDSPASRRIIVGMVKRWDWSLCQPLVVSRRSDGSLLILDGQH RHAGAIERGDIHFLPCVILSALGLEGEAKTFVELNTKRQRLTQAEVFHGMLAAGDPQAKAVADLIAQTGWTVRKGSNTAA YKAGDLECAPMLVKVYAFKGEAPVQFALTALRAAYPDTPVRQSATLLKALVDVFDTMLDDPLPTTKLIAAIGAVQPDTWI SRGIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPAPKPATLAPAPRPRAATKKLA TVFGTSGKGWCEQCDQLVSREKARACTDRFCTARADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38019; Mature: 38019
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPVQNRVPCGPQVGAPPSLEQIPVDRLAVDPTYQRATDSPASRRIIVGMVKRWDWSLC CCCCCCCCCCCCCCCCCCCCHHHCCHHHEECCCCHHHCCCCCCCCCHHHHHHHHCCHHHH QPLVVSRRSDGSLLILDGQHRHAGAIERGDIHFLPCVILSALGLEGEAKTFVELNTKRQR HHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECHHHHH LTQAEVFHGMLAAGDPQAKAVADLIAQTGWTVRKGSNTAAYKAGDLECAPMLVKVYAFKG HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCCHHHHHHHHHHCCC EAPVQFALTALRAAYPDTPVRQSATLLKALVDVFDTMLDDPLPTTKLIAAIGAVQPDTWI CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH SRGIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPA HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKPATLAPAPRPRAATKKLATVFGTSGKGWCEQCDQLVSREKARACTDRFCTARADA CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIAPVQNRVPCGPQVGAPPSLEQIPVDRLAVDPTYQRATDSPASRRIIVGMVKRWDWSLC CCCCCCCCCCCCCCCCCCCCHHHCCHHHEECCCCHHHCCCCCCCCCHHHHHHHHCCHHHH QPLVVSRRSDGSLLILDGQHRHAGAIERGDIHFLPCVILSALGLEGEAKTFVELNTKRQR HHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCEEEEECHHHHH LTQAEVFHGMLAAGDPQAKAVADLIAQTGWTVRKGSNTAAYKAGDLECAPMLVKVYAFKG HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCCHHHHHHHHHHCCC EAPVQFALTALRAAYPDTPVRQSATLLKALVDVFDTMLDDPLPTTKLIAAIGAVQPDTWI CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH SRGIIHRESFPAMSHIAAIAATMVAAAKGQEPPSARPLPTKATPVAPVAAPRTAPTPAPA HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKPATLAPAPRPRAATKKLATVFGTSGKGWCEQCDQLVSREKARACTDRFCTARADA CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA