| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198648
Identifier: 87198648
GI number: 87198648
Start: 669506
End: 669823
Strand: Reverse
Name: 87198648
Synonym: Saro_0624
Alternate gene names: NA
Gene position: 669823-669506 (Counterclockwise)
Preceding gene: 87198649
Following gene: 87198647
Centisome position: 18.81
GC content: 62.26
Gene sequence:
>318_bases ATGGCCGATTTTACTCCCTCCAAAGCGCTGGCGGACGTCACAACCGAGCGGCAACGCCAGATCGAAGTCGAAGGGTACAC CGCGCAGCATGATGACGAACATGACTGCGACGGCGCGCTGTCTCGCGCGGCAGCATGTTACGCGCTCGCTGGCATAGAAG GCGGCAGTGGCCCCTTCTACGTAACCCATCTCCAAACACCAAGGCAGGTCTGGCCGTATCGGTGGGAATGGAAGCCCAGC GATCGGCGCCGCAACCTGGTGAAAGCCGCTGCGCTCATCCTCGCCGAGATCGAACGTCTCGACCGCAAGGAGGGCTGA
Upstream 100 bases:
>100_bases CGCTGCCGAGGAAGCCGCACGGGCCGCGCCACAGTCCCAAGACGATGACGAAGACGACGGCGCCGACGAACTGGTGACCG ACGAGGCGGAGGGCTGAACG
Downstream 100 bases:
>100_bases GCGATGTCATATGCACGCATAGACCACGCCGCATGGGTCGAGGACAACAACCGCGGCTATAACCAGATGTACGCCAAGCG CCGCTCATGGAAGCCAGCGC
Product: GP46
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MADFTPSKALADVTTERQRQIEVEGYTAQHDDEHDCDGALSRAAACYALAGIEGGSGPFYVTHLQTPRQVWPYRWEWKPS DRRRNLVKAAALILAEIERLDRKEG
Sequences:
>Translated_105_residues MADFTPSKALADVTTERQRQIEVEGYTAQHDDEHDCDGALSRAAACYALAGIEGGSGPFYVTHLQTPRQVWPYRWEWKPS DRRRNLVKAAALILAEIERLDRKEG >Mature_104_residues ADFTPSKALADVTTERQRQIEVEGYTAQHDDEHDCDGALSRAAACYALAGIEGGSGPFYVTHLQTPRQVWPYRWEWKPSD RRRNLVKAAALILAEIERLDRKEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11873; Mature: 11742
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFTPSKALADVTTERQRQIEVEGYTAQHDDEHDCDGALSRAAACYALAGIEGGSGPFY CCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE VTHLQTPRQVWPYRWEWKPSDRRRNLVKAAALILAEIERLDRKEG EEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADFTPSKALADVTTERQRQIEVEGYTAQHDDEHDCDGALSRAAACYALAGIEGGSGPFY CCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE VTHLQTPRQVWPYRWEWKPSDRRRNLVKAAALILAEIERLDRKEG EEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA