Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is ypeA [C]

Identifier: 87198573

GI number: 87198573

Start: 600266

End: 600691

Strand: Reverse

Name: ypeA [C]

Synonym: Saro_0549

Alternate gene names: 87198573

Gene position: 600691-600266 (Counterclockwise)

Preceding gene: 87198574

Following gene: 87198569

Centisome position: 16.87

GC content: 68.31

Gene sequence:

>426_bases
GTGGGAGTAACGATCCGCGCTGCCGACCCGGCCGACCGTGAAGCCACGGTCGCGCTGTGGGAAGCTGCCGGACTGACGCG
GCCGTGGAACGACCCACGCGCCGATTTCGACCTCGCGCTGTCGACGCCGACATCGGTCGTCCTGCTGGCCGAAGCGGGCC
GAGACCTGCACGGCAGCGTCATGGTCGGCTTCGACGGCCATCGCGGCTGGGTCTACTACCTGGCCACCTCGCCCGACCGG
CGCGGGCAGGGCATCGGGCGCCAATTGATGCTGGCCGCCGAAGACTGGCTGAAGGCGCATGGCTCGCCCAAGATCCAGCT
CATGGTGCGCGGCGACAATCTGGCCGCGCGAGGGTTCTACGATGCGCTCGGCTATGAGGTTCAGGACGTGGTGACCATCG
GCAAGCGGTTCGCGCCGAATCCTTAG

Upstream 100 bases:

>100_bases
CAGGCTTCCTGAGCCGCGTGGCGACGCGCATCGTCAACGAGGTCAAGGGCATCAACCGCGTGGTCTACGACTACACCTCG
AAGCCGCCGGGCACGATCGA

Downstream 100 bases:

>100_bases
AATCCGCCTAAACCGCCACGAACTTTCCGGCAGCGCGGTCCTTGCGGACCTTCAGACCGTCGAAAACCTGCCCGCTCATA
GCGATCCATATGCCGGGCGC

Product: putative acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDR
RGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP

Sequences:

>Translated_141_residues
MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDR
RGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP
>Mature_140_residues
GVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDRR
GQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP

Specific function: Unknown

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI87082104, Length=138, Percent_Identity=43.4782608695652, Blast_Score=120, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023072
- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 15335; Mature: 15203

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSV
CCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEE
MVGFDGHRGWVYYLATSPDRRGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFY
EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCEEECCHH
DALGYEVQDVVTIGKRFAPNP
HHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSV
CEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEE
MVGFDGHRGWVYYLATSPDRRGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFY
EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCEEECCHH
DALGYEVQDVVTIGKRFAPNP
HHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA