| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ypeA [C]
Identifier: 87198573
GI number: 87198573
Start: 600266
End: 600691
Strand: Reverse
Name: ypeA [C]
Synonym: Saro_0549
Alternate gene names: 87198573
Gene position: 600691-600266 (Counterclockwise)
Preceding gene: 87198574
Following gene: 87198569
Centisome position: 16.87
GC content: 68.31
Gene sequence:
>426_bases GTGGGAGTAACGATCCGCGCTGCCGACCCGGCCGACCGTGAAGCCACGGTCGCGCTGTGGGAAGCTGCCGGACTGACGCG GCCGTGGAACGACCCACGCGCCGATTTCGACCTCGCGCTGTCGACGCCGACATCGGTCGTCCTGCTGGCCGAAGCGGGCC GAGACCTGCACGGCAGCGTCATGGTCGGCTTCGACGGCCATCGCGGCTGGGTCTACTACCTGGCCACCTCGCCCGACCGG CGCGGGCAGGGCATCGGGCGCCAATTGATGCTGGCCGCCGAAGACTGGCTGAAGGCGCATGGCTCGCCCAAGATCCAGCT CATGGTGCGCGGCGACAATCTGGCCGCGCGAGGGTTCTACGATGCGCTCGGCTATGAGGTTCAGGACGTGGTGACCATCG GCAAGCGGTTCGCGCCGAATCCTTAG
Upstream 100 bases:
>100_bases CAGGCTTCCTGAGCCGCGTGGCGACGCGCATCGTCAACGAGGTCAAGGGCATCAACCGCGTGGTCTACGACTACACCTCG AAGCCGCCGGGCACGATCGA
Downstream 100 bases:
>100_bases AATCCGCCTAAACCGCCACGAACTTTCCGGCAGCGCGGTCCTTGCGGACCTTCAGACCGTCGAAAACCTGCCCGCTCATA GCGATCCATATGCCGGGCGC
Product: putative acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDR RGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP
Sequences:
>Translated_141_residues MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDR RGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP >Mature_140_residues GVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSVMVGFDGHRGWVYYLATSPDRR GQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFYDALGYEVQDVVTIGKRFAPNP
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI87082104, Length=138, Percent_Identity=43.4782608695652, Blast_Score=120, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023072 - InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 15335; Mature: 15203
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSV CCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEE MVGFDGHRGWVYYLATSPDRRGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFY EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCEEECCHH DALGYEVQDVVTIGKRFAPNP HHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure GVTIRAADPADREATVALWEAAGLTRPWNDPRADFDLALSTPTSVVLLAEAGRDLHGSV CEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEE MVGFDGHRGWVYYLATSPDRRGQGIGRQLMLAAEDWLKAHGSPKIQLMVRGDNLAARGFY EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCCEEEEEEECCCEEECCHH DALGYEVQDVVTIGKRFAPNP HHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA