| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198555
Identifier: 87198555
GI number: 87198555
Start: 575338
End: 576366
Strand: Reverse
Name: 87198555
Synonym: Saro_0531
Alternate gene names: NA
Gene position: 576366-575338 (Counterclockwise)
Preceding gene: 87198556
Following gene: 87198553
Centisome position: 16.18
GC content: 65.01
Gene sequence:
>1029_bases GTGAACCACTCTCCACGGCTGTTTCAGCTCGACGCGCTGCGCGGGCTCGCTGCGATGGCGATCATGCTGTTTCACCTCGA TCTCGTCTATCGCATCCACGGACCGTTCGTGCGCGGGTACCTGTTCGTGGACATGTTCTTCCTGCTCAGCGGATTCGTGC TGGCGGTTTCGACCGAACGCAAGTTGAAAGCGGGGATCGGTGCGCTGGCGTTCACGCGGGATCGCTTCGTCCGGCTCTGG CCGCTGGTCGCCGTAGGCGCCGGGGTGGCGACAGCCCGCGCGTTTGCCATCGGAATGGCGGACCCGCTGACCTTGCTGCT CTGGCTCGCGCTGGATCTGGCTATGATCCCGAGCTTCTCCGGGACCGGTCCGTTCTACCGCTACAATGGGCCGCAATGGA CACTGTTCTACGAGTTGCTGGCCAACTTCCTTCATGCGCTCGTCCTGCGCAAGGTTCCGACGCGCTGGATGCTTGCGCTC GCGCTCGCACTGGGCGTGGCGCTGATCGTTACGGTGCGCATGCACGGATCCGACACGATGGGGGTAGATGCACCCACCTG GGACACTTGGTGGATGGGGCTGCCGCGCGTGGGCTGGTCCTACGTGCTGGGGGTCTGGATGGGGCGCAAGTACAAGGACG GCGTCCGCGGCCCCGCGCTCCCGTGGTGGCTGACGCTGGCCCTGCCGGTTGTGGCCATTGCCCTGGTCCCGCGCCTGCCG CTCCGCGTTGCACATGGCGATCTGGTTTTCGTGATGGGGTTCCTGCCGCTGGCAGTTTGGGCAGTGGCCCAATCCCGTCC GCCAAAGGCGCTGAAACCGGCGTTCGAATGGTTCGGCAATTATTCGCTGCCGCTCTATTGCGTGCACCTGACCGTGCTCG TCTGGATCTCGGAACTGCTGGGCCGCGCGGCCTGGGTGCAGGCGACGGCGGTTGGTGCCGCCATGCTGCTCGCCTTCGTC TTTTCCAGGCTGATATCGTTCAAGGGCAGACCGACCAGAGGCAAGCCTGACCTTGCGCCGACTGGCTGA
Upstream 100 bases:
>100_bases GAAAGTCACTGATTGCGCAAACCTGCCAGCCGGGTGCAAAGGTCGCATAGGCGCACAAGGGGAAGGGGCCGAATTGACCG ATGCCGCAAATCAGGGTGGG
Downstream 100 bases:
>100_bases TGGTTGGGGCGTGAAGCGCCTGCTCGCTGCCTGAAGCCCCGCCCCACGGCCTTGCACCGTGGAGCGGGATTCCGATGACG GATCAGATTACAATGAAATC
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNHSPRLFQLDALRGLAAMAIMLFHLDLVYRIHGPFVRGYLFVDMFFLLSGFVLAVSTERKLKAGIGALAFTRDRFVRLW PLVAVGAGVATARAFAIGMADPLTLLLWLALDLAMIPSFSGTGPFYRYNGPQWTLFYELLANFLHALVLRKVPTRWMLAL ALALGVALIVTVRMHGSDTMGVDAPTWDTWWMGLPRVGWSYVLGVWMGRKYKDGVRGPALPWWLTLALPVVAIALVPRLP LRVAHGDLVFVMGFLPLAVWAVAQSRPPKALKPAFEWFGNYSLPLYCVHLTVLVWISELLGRAAWVQATAVGAAMLLAFV FSRLISFKGRPTRGKPDLAPTG
Sequences:
>Translated_342_residues MNHSPRLFQLDALRGLAAMAIMLFHLDLVYRIHGPFVRGYLFVDMFFLLSGFVLAVSTERKLKAGIGALAFTRDRFVRLW PLVAVGAGVATARAFAIGMADPLTLLLWLALDLAMIPSFSGTGPFYRYNGPQWTLFYELLANFLHALVLRKVPTRWMLAL ALALGVALIVTVRMHGSDTMGVDAPTWDTWWMGLPRVGWSYVLGVWMGRKYKDGVRGPALPWWLTLALPVVAIALVPRLP LRVAHGDLVFVMGFLPLAVWAVAQSRPPKALKPAFEWFGNYSLPLYCVHLTVLVWISELLGRAAWVQATAVGAAMLLAFV FSRLISFKGRPTRGKPDLAPTG >Mature_342_residues MNHSPRLFQLDALRGLAAMAIMLFHLDLVYRIHGPFVRGYLFVDMFFLLSGFVLAVSTERKLKAGIGALAFTRDRFVRLW PLVAVGAGVATARAFAIGMADPLTLLLWLALDLAMIPSFSGTGPFYRYNGPQWTLFYELLANFLHALVLRKVPTRWMLAL ALALGVALIVTVRMHGSDTMGVDAPTWDTWWMGLPRVGWSYVLGVWMGRKYKDGVRGPALPWWLTLALPVVAIALVPRLP LRVAHGDLVFVMGFLPLAVWAVAQSRPPKALKPAFEWFGNYSLPLYCVHLTVLVWISELLGRAAWVQATAVGAAMLLAFV FSRLISFKGRPTRGKPDLAPTG
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37915; Mature: 37915
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSPRLFQLDALRGLAAMAIMLFHLDLVYRIHGPFVRGYLFVDMFFLLSGFVLAVSTER CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCHH KLKAGIGALAFTRDRFVRLWPLVAVGAGVATARAFAIGMADPLTLLLWLALDLAMIPSFS HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC GTGPFYRYNGPQWTLFYELLANFLHALVLRKVPTRWMLALALALGVALIVTVRMHGSDTM CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCC GVDAPTWDTWWMGLPRVGWSYVLGVWMGRKYKDGVRGPALPWWLTLALPVVAIALVPRLP CCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LRVAHGDLVFVMGFLPLAVWAVAQSRPPKALKPAFEWFGNYSLPLYCVHLTVLVWISELL CEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GRAAWVQATAVGAAMLLAFVFSRLISFKGRPTRGKPDLAPTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNHSPRLFQLDALRGLAAMAIMLFHLDLVYRIHGPFVRGYLFVDMFFLLSGFVLAVSTER CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCHH KLKAGIGALAFTRDRFVRLWPLVAVGAGVATARAFAIGMADPLTLLLWLALDLAMIPSFS HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC GTGPFYRYNGPQWTLFYELLANFLHALVLRKVPTRWMLALALALGVALIVTVRMHGSDTM CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCC GVDAPTWDTWWMGLPRVGWSYVLGVWMGRKYKDGVRGPALPWWLTLALPVVAIALVPRLP CCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC LRVAHGDLVFVMGFLPLAVWAVAQSRPPKALKPAFEWFGNYSLPLYCVHLTVLVWISELL CEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GRAAWVQATAVGAAMLLAFVFSRLISFKGRPTRGKPDLAPTG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA