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The map label for this gene is 87198556

Identifier: 87198556

GI number: 87198556

Start: 576491

End: 577765

Strand: Reverse

Name: 87198556

Synonym: Saro_0532

Alternate gene names: NA

Gene position: 577765-576491 (Counterclockwise)

Preceding gene: 87198557

Following gene: 87198555

Centisome position: 16.22

GC content: 62.12

Gene sequence:

>1275_bases
ATGCGCGCGATGAGCCTTGCAGACGTGCCAGACGTAGCGCGCGCCCTTCCTGACCCGCGATCCCGCATCCTCGCGGCGGC
CGGCGAAATCTTCCGAAGGGAAGGTTTCGCCGGAACGACGGTCGATGCCGTTGCCGCCATCGCGCGAATGAGCAAGGAAA
GCATCTACGACCTGTTCCCCACCAAGAGCGCGCTCTTCGAAGCCGCGGTCCGCGCCTCGATCGACAAGCATGTCTACCAT
GGGCCCGCCGAAGGCCCGGCGGAAAGCGTCGACGCGTTTCTTGCCCACATGGGTACGAGCATGTTCGAGCGGTATGTCGA
ACCGATGAACTTCGGGTTGTTCCGCAACAACATCGAAGCGGCGAACCATTTTCCCGAACTGGCCTCGACCCTGCATGAGC
ATCGCCGCCAGGCTTCACAGGCGAATGCGGTGCACCTCCAGCCCTGGATCGACCGGGGCTGCCTGCAGACGACAGACGCG
CTTGCAACGGTTATCCGGTTTTCCAGTCTTTGCATCGGCGGTAGCCGGTACTTCCTTGGACATCCCTTGCCGTCGAAAGG
AGAACGCCGGCAATTGGTGGAACGAACCGTGTCCCTGTTCCTTGACGGATATGGCTCCGTCACGTCCGGAACGCCCGCCG
CGTTTGCTCCGCCGCAGCCCCGTTCGCACCATCCGGCGACGACGGTGCGGATGTCCACCGCCCGCATCCGGGAAATGCTG
GATGCAATCGAGGACGAGTTCCTCCGCCATGGATACCGTTCCGCCAGCATCGATCGCGCCGTAAGCGTCGTGAAAGTCGG
CAAGACTACCGTCTACCGGCAGTTCGGAAACAAGGAAGGCGTCTTCCGTCACATCATTGAAGACAGGATCGTCGCAGAGG
CGGAGCGGACTTACGATACCGCACCCGATGCCGCCACGCTCGAAGATGCGCTTGCGTCGCTTGCCCGGCAGGCGCTCGAC
AATCATTGCGAAGGCGACAACATTCACCTGCACCGGTTGCTGATCCAGGAATCCGAGGCATTCCCGGATCTGGCCCGAGC
ATTCTACGACGCCAAGATCCATGCATTGAGCAAGGGTCTTTGCGCCGTCACCGACAGATTTGGCGCGCCCAAGCCAGACC
AGGCCTCGATCGAGGATTTCCACAACCTCGCCACCTCGGCGCTGCGCTACGTCACGACAAAGGATTTGCCCTCGAGGGAA
GAACGTACGGTGGATGCGGCGGAAGTCAGCCGCCTCTTTGTTCGGGGCATGCGCTCGCCGCCGCGTCTGCCTTGA

Upstream 100 bases:

>100_bases
GCACCATCGCCAGGCTTGAAATCGTCCCCGGCGATGCGGGTGCTCCGACGCCTGTGGAGCGGTAGGCGCACGGCTGGAGA
AACGTTTCGTTGGATGATAG

Downstream 100 bases:

>100_bases
AGCATCCGACTGCCCGATTGCGCTGAAAGTCACTGATTGCGCAAACCTGCCAGCCGGGTGCAAAGGTCGCATAGGCGCAC
AAGGGGAAGGGGCCGAATTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRAMSLADVPDVARALPDPRSRILAAAGEIFRREGFAGTTVDAVAAIARMSKESIYDLFPTKSALFEAAVRASIDKHVYH
GPAEGPAESVDAFLAHMGTSMFERYVEPMNFGLFRNNIEAANHFPELASTLHEHRRQASQANAVHLQPWIDRGCLQTTDA
LATVIRFSSLCIGGSRYFLGHPLPSKGERRQLVERTVSLFLDGYGSVTSGTPAAFAPPQPRSHHPATTVRMSTARIREML
DAIEDEFLRHGYRSASIDRAVSVVKVGKTTVYRQFGNKEGVFRHIIEDRIVAEAERTYDTAPDAATLEDALASLARQALD
NHCEGDNIHLHRLLIQESEAFPDLARAFYDAKIHALSKGLCAVTDRFGAPKPDQASIEDFHNLATSALRYVTTKDLPSRE
ERTVDAAEVSRLFVRGMRSPPRLP

Sequences:

>Translated_424_residues
MRAMSLADVPDVARALPDPRSRILAAAGEIFRREGFAGTTVDAVAAIARMSKESIYDLFPTKSALFEAAVRASIDKHVYH
GPAEGPAESVDAFLAHMGTSMFERYVEPMNFGLFRNNIEAANHFPELASTLHEHRRQASQANAVHLQPWIDRGCLQTTDA
LATVIRFSSLCIGGSRYFLGHPLPSKGERRQLVERTVSLFLDGYGSVTSGTPAAFAPPQPRSHHPATTVRMSTARIREML
DAIEDEFLRHGYRSASIDRAVSVVKVGKTTVYRQFGNKEGVFRHIIEDRIVAEAERTYDTAPDAATLEDALASLARQALD
NHCEGDNIHLHRLLIQESEAFPDLARAFYDAKIHALSKGLCAVTDRFGAPKPDQASIEDFHNLATSALRYVTTKDLPSRE
ERTVDAAEVSRLFVRGMRSPPRLP
>Mature_424_residues
MRAMSLADVPDVARALPDPRSRILAAAGEIFRREGFAGTTVDAVAAIARMSKESIYDLFPTKSALFEAAVRASIDKHVYH
GPAEGPAESVDAFLAHMGTSMFERYVEPMNFGLFRNNIEAANHFPELASTLHEHRRQASQANAVHLQPWIDRGCLQTTDA
LATVIRFSSLCIGGSRYFLGHPLPSKGERRQLVERTVSLFLDGYGSVTSGTPAAFAPPQPRSHHPATTVRMSTARIREML
DAIEDEFLRHGYRSASIDRAVSVVKVGKTTVYRQFGNKEGVFRHIIEDRIVAEAERTYDTAPDAATLEDALASLARQALD
NHCEGDNIHLHRLLIQESEAFPDLARAFYDAKIHALSKGLCAVTDRFGAPKPDQASIEDFHNLATSALRYVTTKDLPSRE
ERTVDAAEVSRLFVRGMRSPPRLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46846; Mature: 46846

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMSLADVPDVARALPDPRSRILAAAGEIFRREGFAGTTVDAVAAIARMSKESIYDLFP
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
TKSALFEAAVRASIDKHVYHGPAEGPAESVDAFLAHMGTSMFERYVEPMNFGLFRNNIEA
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ANHFPELASTLHEHRRQASQANAVHLQPWIDRGCLQTTDALATVIRFSSLCIGGSRYFLG
HHHHHHHHHHHHHHHHHHHHCCCEEECHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HPLPSKGERRQLVERTVSLFLDGYGSVTSGTPAAFAPPQPRSHHPATTVRMSTARIREML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHH
DAIEDEFLRHGYRSASIDRAVSVVKVGKTTVYRQFGNKEGVFRHIIEDRIVAEAERTYDT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
APDAATLEDALASLARQALDNHCEGDNIHLHRLLIQESEAFPDLARAFYDAKIHALSKGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH
CAVTDRFGAPKPDQASIEDFHNLATSALRYVTTKDLPSREERTVDAAEVSRLFVRGMRSP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCC
PRLP
CCCC
>Mature Secondary Structure
MRAMSLADVPDVARALPDPRSRILAAAGEIFRREGFAGTTVDAVAAIARMSKESIYDLFP
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
TKSALFEAAVRASIDKHVYHGPAEGPAESVDAFLAHMGTSMFERYVEPMNFGLFRNNIEA
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ANHFPELASTLHEHRRQASQANAVHLQPWIDRGCLQTTDALATVIRFSSLCIGGSRYFLG
HHHHHHHHHHHHHHHHHHHHCCCEEECHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HPLPSKGERRQLVERTVSLFLDGYGSVTSGTPAAFAPPQPRSHHPATTVRMSTARIREML
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHHH
DAIEDEFLRHGYRSASIDRAVSVVKVGKTTVYRQFGNKEGVFRHIIEDRIVAEAERTYDT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
APDAATLEDALASLARQALDNHCEGDNIHLHRLLIQESEAFPDLARAFYDAKIHALSKGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH
CAVTDRFGAPKPDQASIEDFHNLATSALRYVTTKDLPSREERTVDAAEVSRLFVRGMRSP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCCC
PRLP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA