Click here to switch to the map view.

The map label for this gene is yvrE [H]

Identifier: 87198541

GI number: 87198541

Start: 557813

End: 558748

Strand: Reverse

Name: yvrE [H]

Synonym: Saro_0517

Alternate gene names: 87198541

Gene position: 558748-557813 (Counterclockwise)

Preceding gene: 87198542

Following gene: 87198540

Centisome position: 15.69

GC content: 63.03

Gene sequence:

>936_bases
ATGATGGAAGGTGATCGGTGGCGGTGCCTCTGGGATGCCAAGGCTATCCTCGGCGAAGGCACGATCTGGGACGAGCGCGA
CGGCTGCATCTATTGGGTGGACATCGAAGCCCCCAGCGTGAACTGGTTCAACCTTGAAACGGGCAGCAAGGGCACCTGGG
TTCCGCCGAAGTGGGTCAGCGCCATAGCGCCACGTTCGTCAGGTGGCTTCATCGCCTCTTCCGCCGATGGGTTCGTCCAC
ATCGATCCGCACGCGGACATCTATCACCCGCTCGTTCATCCGATCTCCGACCCCCGGATTGCGAGGCTGAACGACGGCGT
GGTCGACCGAAGCGGCCGCTACTGGTCAGGCTCCTGCGACTGCAGCCAATGGGACGAAAGCACCACGGCCGAGGACAAGG
AAAGCACGCTCGGCAACCTTGACGCCCGGAACACTGGCGAACTCTACCGCCTCGCCGCGGACGGCACGGTCTCCTCGCAG
GAACAGAACATCGTCACTGCAAATGGCCCGGCCTTCAGCCCCGATGGCAAGACCGCTTACGTCAACGACTCCATGCCGCT
GGTGAGCTGGGCCTACGATGTGGACGCAGACGGAAACCTCCGCAACCGGCGCGATTTCCTCCGCTTCAAGCCAGAAGACG
GCTACCCCGACGGAATGGCGGTGGACGTGGAGGGCTGCATCTGGATGGCATTCTACGAAAGCTGGATGCTGCGCCGTTTC
GCGCCGGACGGCACCTTGCTGGAAGATCGCCAATTGCCTGTACGGCGCGGCCTGCGCCCTGCCTTTGGCGGGACCGACCA
TTCCCGGCTGTTCCTGATCACCGGATCGCAGGGCTACGGAGCCGAACAGTTCGCCCAGCAACCTCTCGCGGGCGGGCTTT
TCGAAATTCTTGATCCTCCTGCCGCTGGCGTGCCAAACGTGCCATTTGCAGGTTGA

Upstream 100 bases:

>100_bases
AACAATTTGGTTGCCCGCGCAGACTAATCATGATTAGGTTTGAGTTTACACTCCGGCAAGAGCCCCCGCTCTTGCGCGAT
ACAGGAAGCGGGATGACGAG

Downstream 100 bases:

>100_bases
TTGCAAAGCGCTGGTGCATCAGTTGTGCCTGAGACAGATGAAGATTGATTATGGCACAAGTAGAAAACGGCAAGACGCGC
ATTCTTGACTCGGCTGCGAC

Product: gluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MMEGDRWRCLWDAKAILGEGTIWDERDGCIYWVDIEAPSVNWFNLETGSKGTWVPPKWVSAIAPRSSGGFIASSADGFVH
IDPHADIYHPLVHPISDPRIARLNDGVVDRSGRYWSGSCDCSQWDESTTAEDKESTLGNLDARNTGELYRLAADGTVSSQ
EQNIVTANGPAFSPDGKTAYVNDSMPLVSWAYDVDADGNLRNRRDFLRFKPEDGYPDGMAVDVEGCIWMAFYESWMLRRF
APDGTLLEDRQLPVRRGLRPAFGGTDHSRLFLITGSQGYGAEQFAQQPLAGGLFEILDPPAAGVPNVPFAG

Sequences:

>Translated_311_residues
MMEGDRWRCLWDAKAILGEGTIWDERDGCIYWVDIEAPSVNWFNLETGSKGTWVPPKWVSAIAPRSSGGFIASSADGFVH
IDPHADIYHPLVHPISDPRIARLNDGVVDRSGRYWSGSCDCSQWDESTTAEDKESTLGNLDARNTGELYRLAADGTVSSQ
EQNIVTANGPAFSPDGKTAYVNDSMPLVSWAYDVDADGNLRNRRDFLRFKPEDGYPDGMAVDVEGCIWMAFYESWMLRRF
APDGTLLEDRQLPVRRGLRPAFGGTDHSRLFLITGSQGYGAEQFAQQPLAGGLFEILDPPAAGVPNVPFAG
>Mature_311_residues
MMEGDRWRCLWDAKAILGEGTIWDERDGCIYWVDIEAPSVNWFNLETGSKGTWVPPKWVSAIAPRSSGGFIASSADGFVH
IDPHADIYHPLVHPISDPRIARLNDGVVDRSGRYWSGSCDCSQWDESTTAEDKESTLGNLDARNTGELYRLAADGTVSSQ
EQNIVTANGPAFSPDGKTAYVNDSMPLVSWAYDVDADGNLRNRRDFLRFKPEDGYPDGMAVDVEGCIWMAFYESWMLRRF
APDGTLLEDRQLPVRRGLRPAFGGTDHSRLFLITGSQGYGAEQFAQQPLAGGLFEILDPPAAGVPNVPFAG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=312, Percent_Identity=29.8076923076923, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI4759036, Length=312, Percent_Identity=29.8076923076923, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24641471, Length=325, Percent_Identity=25.2307692307692, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI18860103, Length=325, Percent_Identity=25.2307692307692, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24641469, Length=325, Percent_Identity=25.2307692307692, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI45551448, Length=325, Percent_Identity=25.2307692307692, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 34299; Mature: 34299

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEGDRWRCLWDAKAILGEGTIWDERDGCIYWVDIEAPSVNWFNLETGSKGTWVPPKWVS
CCCCCEEEEEEECHHHHCCCCEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHHH
AIAPRSSGGFIASSADGFVHIDPHADIYHPLVHPISDPRIARLNDGVVDRSGRYWSGSCD
HHCCCCCCCEEEECCCCEEEECCCCCHHHHHHCCCCCCEEEECCCCEECCCCCEECCCCC
CSQWDESTTAEDKESTLGNLDARNTGELYRLAADGTVSSQEQNIVTANGPAFSPDGKTAY
CCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCEECCCCCEEE
VNDSMPLVSWAYDVDADGNLRNRRDFLRFKPEDGYPDGMAVDVEGCIWMAFYESWMLRRF
EECCCCEEEEEEECCCCCCCCCCCHHEEECCCCCCCCCEEEECCCEEEHHHHHHHHHHHC
APDGTLLEDRQLPVRRGLRPAFGGTDHSRLFLITGSQGYGAEQFAQQPLAGGLFEILDPP
CCCCCEECCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHCCCC
AAGVPNVPFAG
CCCCCCCCCCC
>Mature Secondary Structure
MMEGDRWRCLWDAKAILGEGTIWDERDGCIYWVDIEAPSVNWFNLETGSKGTWVPPKWVS
CCCCCEEEEEEECHHHHCCCCEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCHHHHH
AIAPRSSGGFIASSADGFVHIDPHADIYHPLVHPISDPRIARLNDGVVDRSGRYWSGSCD
HHCCCCCCCEEEECCCCEEEECCCCCHHHHHHCCCCCCEEEECCCCEECCCCCEECCCCC
CSQWDESTTAEDKESTLGNLDARNTGELYRLAADGTVSSQEQNIVTANGPAFSPDGKTAY
CCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCEECCCCCEEE
VNDSMPLVSWAYDVDADGNLRNRRDFLRFKPEDGYPDGMAVDVEGCIWMAFYESWMLRRF
EECCCCEEEEEEECCCCCCCCCCCHHEEECCCCCCCCCEEEECCCEEEHHHHHHHHHHHC
APDGTLLEDRQLPVRRGLRPAFGGTDHSRLFLITGSQGYGAEQFAQQPLAGGLFEILDPP
CCCCCEECCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHCCCC
AAGVPNVPFAG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]