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The map label for this gene is yfhF [C]

Identifier: 87198227

GI number: 87198227

Start: 207125

End: 207487

Strand: Direct

Name: yfhF [C]

Synonym: Saro_0201

Alternate gene names: 87198227

Gene position: 207125-207487 (Clockwise)

Preceding gene: 87198226

Following gene: 87198230

Centisome position: 5.82

GC content: 65.29

Gene sequence:

>363_bases
ATGACGACCGAGACCAAAGTCCGCCGCCCCCGCCCCGCCGCCGTGATCCTCACGGCCAGCGCGGAGGCGCGCATCGCGAA
TCTGATGGAAAACGCGCCCGAAGGCGCGATCGGGGTCAAGCTGTCCACGCCCCGGCGTGGCTGCTCGGGCCTTGCCTACT
CGGTCGACTACGTCACCGAGGCAAACCCGATGGACGAGAGGATCGAGACGCCCGGCGGCCTGTTCTTCATCGACAGCGCC
TCGGTGCTCTACCTGATCGGCAGCACGATGGATTGGCAGGAAGACGATTTCACCGCCGGTTTCGTGTTCCAGAACCCCAA
CGCCAAGGGTTCGTGCGGTTGCGGCGAGAGCTTTACGGTCTGA

Upstream 100 bases:

>100_bases
TCAATCTCGTCTGGGATCCGCCGTGGGACCCCCAGAAGATGAGCGACGAGGCCAAGCTAGAACTGGGAATGCTCTGACCG
CTCCCCATATAGGTGTCACC

Downstream 100 bases:

>100_bases
AGCGGTCCTATTGGACGCTTGCCATCGCTTCCGTTTGCCGTCTTGATCACCCGATTAAGTCAGCGGAGTAGCGCGATGCA
AAGCCTCGAGGATCTGCGCC

Product: HesB/YadR/YfhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTTETKVRRPRPAAVILTASAEARIANLMENAPEGAIGVKLSTPRRGCSGLAYSVDYVTEANPMDERIETPGGLFFIDSA
SVLYLIGSTMDWQEDDFTAGFVFQNPNAKGSCGCGESFTV

Sequences:

>Translated_120_residues
MTTETKVRRPRPAAVILTASAEARIANLMENAPEGAIGVKLSTPRRGCSGLAYSVDYVTEANPMDERIETPGGLFFIDSA
SVLYLIGSTMDWQEDDFTAGFVFQNPNAKGSCGCGESFTV
>Mature_119_residues
TTETKVRRPRPAAVILTASAEARIANLMENAPEGAIGVKLSTPRRGCSGLAYSVDYVTEANPMDERIETPGGLFFIDSAS
VLYLIGSTMDWQEDDFTAGFVFQNPNAKGSCGCGESFTV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=112, Percent_Identity=42.8571428571429, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=38.3177570093458, Blast_Score=83, Evalue=5e-18,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=2e-14,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=115, Percent_Identity=40.8695652173913, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193209025, Length=116, Percent_Identity=39.6551724137931, Blast_Score=93, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=43.5185185185185, Blast_Score=98, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24642263, Length=111, Percent_Identity=42.3423423423423, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12859; Mature: 12727

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETKVRRPRPAAVILTASAEARIANLMENAPEGAIGVKLSTPRRGCSGLAYSVDYVTE
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEC
ANPMDERIETPGGLFFIDSASVLYLIGSTMDWQEDDFTAGFVFQNPNAKGSCGCGESFTV
CCCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTETKVRRPRPAAVILTASAEARIANLMENAPEGAIGVKLSTPRRGCSGLAYSVDYVTE
CCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEEEEC
ANPMDERIETPGGLFFIDSASVLYLIGSTMDWQEDDFTAGFVFQNPNAKGSCGCGESFTV
CCCCHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]