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The map label for this gene is ycjD [C]

Identifier: 87198222

GI number: 87198222

Start: 203407

End: 203928

Strand: Direct

Name: ycjD [C]

Synonym: Saro_0196

Alternate gene names: 87198222

Gene position: 203407-203928 (Clockwise)

Preceding gene: 87198221

Following gene: 87198223

Centisome position: 5.71

GC content: 68.2

Gene sequence:

>522_bases
ATGAAGAAGACCCTTTCCCTGCGTCCGGCGAGCGAACGCGCCGACGTTCCCAATATCCAGAAGAAGGGGCGCGGCTGGGT
CATTTCCGGCTCGCGGCTCGACGCGATTCACGACATGGCGCGCGAAATGCGCCGCGAGCCCGACGAGGCTCACGCTGCGC
TGGCCGAGGAACTGGCGAAGGAAGATCTCGGCAAGTACAAGTTCAAGCGTTACGCGGTTATCGGGTCGGCCATTGTCGAT
TTCGCCTGCCAGCCGCTCAAGCTGGTCGTGGCGCTCGACCGGGGCGACGCCCCGGAAATCGAACGCCGCCGCGATGCGAG
CCTTGCCGCCGTCGGCCTCAAGGTCGTGCGTTATGACGCGGCCGAAGTTCTCGGCGATCCCGAAGGCGCGGGCCGCGCGG
TGCTGGCCGCGATGAAGGCTCGTTACGAGGAACTGCGCGCCGCCGCGCGCCCGCAGCGCTCCACCTATTCGCGCTCCGGT
GCACGCCCCCAGCGCAGCCATTCCCCCCGGTCGCGGGGCTGA

Upstream 100 bases:

>100_bases
CAGGGTCCATCTCTCGTCCAGCATCGGCGGTTTCGGTCGCCAGATGGACGCTGAAACAAGTTCAGCATGACGAGCAACAT
TTTGCATTGGGCCAGCCGCA

Downstream 100 bases:

>100_bases
AAGAGAAGACGATGCTCACAATCGAAAACCTTCAGGCCAACGTTGCCGACAAGCCCATCCTCAAGGGCCTTTCGCTCACC
ATCAATGCCGGCGAAATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKTLSLRPASERADVPNIQKKGRGWVISGSRLDAIHDMAREMRREPDEAHAALAEELAKEDLGKYKFKRYAVIGSAIVD
FACQPLKLVVALDRGDAPEIERRRDASLAAVGLKVVRYDAAEVLGDPEGAGRAVLAAMKARYEELRAAARPQRSTYSRSG
ARPQRSHSPRSRG

Sequences:

>Translated_173_residues
MKKTLSLRPASERADVPNIQKKGRGWVISGSRLDAIHDMAREMRREPDEAHAALAEELAKEDLGKYKFKRYAVIGSAIVD
FACQPLKLVVALDRGDAPEIERRRDASLAAVGLKVVRYDAAEVLGDPEGAGRAVLAAMKARYEELRAAARPQRSTYSRSG
ARPQRSHSPRSRG
>Mature_173_residues
MKKTLSLRPASERADVPNIQKKGRGWVISGSRLDAIHDMAREMRREPDEAHAALAEELAKEDLGKYKFKRYAVIGSAIVD
FACQPLKLVVALDRGDAPEIERRRDASLAAVGLKVVRYDAAEVLGDPEGAGRAVLAAMKARYEELRAAARPQRSTYSRSG
ARPQRSHSPRSRG

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19077; Mature: 19077

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLSLRPASERADVPNIQKKGRGWVISGSRLDAIHDMAREMRREPDEAHAALAEELAK
CCCCCCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EDLGKYKFKRYAVIGSAIVDFACQPLKLVVALDRGDAPEIERRRDASLAAVGLKVVRYDA
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEVLGDPEGAGRAVLAAMKARYEELRAAARPQRSTYSRSGARPQRSHSPRSRG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTLSLRPASERADVPNIQKKGRGWVISGSRLDAIHDMAREMRREPDEAHAALAEELAK
CCCCCCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EDLGKYKFKRYAVIGSAIVDFACQPLKLVVALDRGDAPEIERRRDASLAAVGLKVVRYDA
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEVLGDPEGAGRAVLAAMKARYEELRAAARPQRSTYSRSGARPQRSHSPRSRG
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA