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The map label for this gene is sufB [C]

Identifier: 87198221

GI number: 87198221

Start: 201786

End: 203267

Strand: Direct

Name: sufB [C]

Synonym: Saro_0195

Alternate gene names: 87198221

Gene position: 201786-203267 (Clockwise)

Preceding gene: 87198220

Following gene: 87198222

Centisome position: 5.67

GC content: 62.69

Gene sequence:

>1482_bases
ATGACCGATAATACAGAAGTGAAGGATCAGGCTGCGCGCGAGGCTGCCGCTAGGGTTGCCGAGTACGAGCATGGCTGGGT
TTCCGACATCGAGCAGGAATACGGGCCCAAGGGCCTGTCCGAGGACACCGTCCGCTTCATCTCGGCCAAGAAGGACGAGC
CGGAGTGGATGCTCGAATGGCGCCTCAAGGCCTATCGCCACTGGCTGACCATGCCCACGCCCGAATGGGCCAAGCTGAAC
ATCCCGCCGATCGACTACCAGGAGGCCTATTACTGGGCTGCGCCCAAGGCCAAGCCGAAGCTCGGCAGCCTGGACGAGGT
CGATCCGGAAATCCTGCGCGTCTATGAAAAGCTCGGCATTCCGCTGGAGGAGCAGAAGGTGCTCGCCGGCGTCGAAGGCG
CGCGCAAGGTCGCGGTCGATGCCGTGTTCGATTCGGTCTCCGTCGCCACGACCTTCCGCAAGGAGCTGGAAGCGGCGGGC
GTCATCTTCCGTTCGATCTCCGAGGCGATCCGCGAATACCCCGATCTCGTCCGCAAGTGGCTGGGCAAGGTCGTGCCCAT
GCACGACAACTACTTCGCCACTCTGAACTGCGCGGTCTTTTCGGACGGCACCTTCGTCTACATCCCCGAAGGCGTGCGCT
GCCCGATGGAGCTGAGCACCTATTTCCGCATCAACGCGGAGAACACCGGCCAGTTCGAGCGTACCCTGATCGTGGCCGAC
AAGGGCAGCTACGTCAGCTACCTCGAGGGCTGCACCGCGCCGCAGCGCGACGAGAACCAGCTCCATGCTGCGGTCGTCGA
ACTGGTCGCGCTCGATGATGCCGAGATCAAGTATTCGACCGTGCAGAACTGGTATCCGGGCGATGCCGAAGGTCGCGGCG
GCATTTACAATTTCGTGACCAAGCGCGCTCTGTGCCAGGGCGCGCGGTCCAAGGTGTCGTGGACGCAGGTCGAAACCGGC
TCGGCGATCACCTGGAAGTATCCGTCCTGCGTACTCAACGGCGAGGACTCGGTGGGCGAGTTCTACTCGGTCGCCGTGAC
CAACAACCATCAACAGGCCGATACCGGCACCAAGATGATCCACAACGGCAAGGGCAGCCGCTCGACCATCGTGTCGAAGG
GCATTTCCGCCGGCAAGTCGAACAACACCTATCGCGGCCTCGTCCGCGTTGCTCCGCAGGCCGAAGGCGTGCGCAACTTC
ACGCAGTGCGACAGCCTTCTGCTGGGCTCGGATTGCGGCGCGCATACCGTGCCCTACATCGAAGTTCGCAATCCCTCCGC
CACGATCGAGCACGAGGCGACGACAAGCAAGATCAGCGACGACCAGCTGTTCTACGCCATGCAGCGCGGGCTCGACCAGG
AAAGCGCGGTGGCGCTGATCGTCAACGGTTTTGCGCGCGAAGTGCTGCAGCAGTTGCCCATGGAATTCGCGGTCGAGGCG
CAGAAGCTGCTTGGCATTTCGCTCGAAGGAAGCGTGGGATGA

Upstream 100 bases:

>100_bases
CCGCCGTCGATGCCGCACTTCGCGGCGCGCTGGCGGGCATACCGCTTACCCAATTGTCCCGCCCCGCCGTCCAGGCGGTA
CCGGTGGCGGAGGTTCTGGC

Downstream 100 bases:

>100_bases
TGCCATCGCTTCTCACTCATCGTCACCCTGAACCTGTTTCAGGGTCCATCTCTCGTCCAGCATCGGCGGTTTCGGTCGCC
AGATGGACGCTGAAACAAGT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEWRLKAYRHWLTMPTPEWAKLN
IPPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGIPLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAG
VIFRSISEAIREYPDLVRKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAD
KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRALCQGARSKVSWTQVETG
SAITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMIHNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNF
TQCDSLLLGSDCGAHTVPYIEVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEA
QKLLGISLEGSVG

Sequences:

>Translated_493_residues
MTDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEWRLKAYRHWLTMPTPEWAKLN
IPPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGIPLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAG
VIFRSISEAIREYPDLVRKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAD
KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRALCQGARSKVSWTQVETG
SAITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMIHNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNF
TQCDSLLLGSDCGAHTVPYIEVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEA
QKLLGISLEGSVG
>Mature_492_residues
TDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEWRLKAYRHWLTMPTPEWAKLNI
PPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGIPLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAGV
IFRSISEAIREYPDLVRKWLGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVADK
GSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVTKRALCQGARSKVSWTQVETGS
AITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMIHNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNFT
QCDSLLLGSDCGAHTVPYIEVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEAQ
KLLGISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=506, Percent_Identity=58.695652173913, Blast_Score=622, Evalue=1e-179,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=30.718954248366, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54714; Mature: 54583

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
RLKAYRHWLTMPTPEWAKLNIPPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGI
HHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
PLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAGVIFRSISEAIREYPDLVRKW
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAD
HHCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEC
KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVT
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCHHHHHH
KRALCQGARSKVSWTQVETGSAITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMI
HHHHHHHHCCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCCCCCCCHHHH
HNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNFTQCDSLLLGSDCGAHTVPYI
CCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCCCEE
EVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEA
EECCCCCCEECCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKLLGISLEGSVG
HHHHEEEECCCCC
>Mature Secondary Structure 
TDNTEVKDQAAREAAARVAEYEHGWVSDIEQEYGPKGLSEDTVRFISAKKDEPEWMLEW
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
RLKAYRHWLTMPTPEWAKLNIPPIDYQEAYYWAAPKAKPKLGSLDEVDPEILRVYEKLGI
HHHHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
PLEEQKVLAGVEGARKVAVDAVFDSVSVATTFRKELEAAGVIFRSISEAIREYPDLVRKW
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGKVVPMHDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAD
HHCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEC
KGSYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIYNFVT
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCCCCCCCHHHHHH
KRALCQGARSKVSWTQVETGSAITWKYPSCVLNGEDSVGEFYSVAVTNNHQQADTGTKMI
HHHHHHHHCCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCCCCCCCHHHH
HNGKGSRSTIVSKGISAGKSNNTYRGLVRVAPQAEGVRNFTQCDSLLLGSDCGAHTVPYI
CCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEEECCCCCCCCCCEE
EVRNPSATIEHEATTSKISDDQLFYAMQRGLDQESAVALIVNGFAREVLQQLPMEFAVEA
EECCCCCCEECCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QKLLGISLEGSVG
HHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]