| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is msrA2 [H]
Identifier: 87198184
GI number: 87198184
Start: 155613
End: 156290
Strand: Direct
Name: msrA2 [H]
Synonym: Saro_0158
Alternate gene names: 87198184
Gene position: 155613-156290 (Clockwise)
Preceding gene: 87198183
Following gene: 87198185
Centisome position: 4.37
GC content: 64.9
Gene sequence:
>678_bases ATGAGGCGTCCGGTCCTAGCCGCTGCTCTGCTGGCCGGGATCGTCACCGCGTCCTGCCAGCAGACCGCGCAGGCAGAAGG CGCCGTGGCGGCGCCCGAGGCTGCGGTTCAGGCGGACGAAGCGCCAGGCCGCAAGGTTGCGATCTTCGCAGGCGGTTGCT TCTGGGGCGTCGAGGGGGTGTTCAGCCACGTCAAGGGCGTGACCAGCGTGGTCTCGGGCTACCATGGGGGCGAAAAGAAG ACCGCGAGCTACGATGTCGTCGGCACCGGCCGGACCGGCCATGCCGAGGCTGTTCGGGTCACCTACGATCCGGCCAAGGT GCGCTACGACCAGCTTCTCCGGATATTCTTCGCTGTCGTGACCGATCCGACGCAGTTGAACTACCAGGGGCCGGACGACG GCACCCAGTATCGCAACGCTCTGGTGCCGATGGACAAGGAACAGGCACGCGTGGCGGCCGGATACCTGGCCCAGTTGAAG CGGCTCGATCTCTGGAAGCGGCCCATCGTGACAGCAGTCGAGCCTTACAAGACGTTCTATCCGGCCGAGGGCTATCATCA GGACTTCATGGCCAACAATCCCGACCACGGTTATATCCGCCGCTGGGATGCGCCCAAGGTCCAGGCGCTCAAGCGCATGT TCCCCGATCTCTACAAGCCGGCCTTCACGCGGAACTGA
Upstream 100 bases:
>100_bases ATGGCGATGTCCGTTGGCGCGACCGCCTGGGCCTCGGCGGACAGCGCCCCGGTCACGAACTCCGGCACGAGCCACGCCAC CGGCCAGACCGGCCGCTGAG
Downstream 100 bases:
>100_bases TTTGCGCATCCGCGCGGCGCTGCCTATCTAGAGGCCATGGCGGGGCATCACCATCATCATGATTTCGCGGGCGAGAAGCT GGTAAAGGCGGCGCGCGACG
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MRRPVLAAALLAGIVTASCQQTAQAEGAVAAPEAAVQADEAPGRKVAIFAGGCFWGVEGVFSHVKGVTSVVSGYHGGEKK TASYDVVGTGRTGHAEAVRVTYDPAKVRYDQLLRIFFAVVTDPTQLNYQGPDDGTQYRNALVPMDKEQARVAAGYLAQLK RLDLWKRPIVTAVEPYKTFYPAEGYHQDFMANNPDHGYIRRWDAPKVQALKRMFPDLYKPAFTRN
Sequences:
>Translated_225_residues MRRPVLAAALLAGIVTASCQQTAQAEGAVAAPEAAVQADEAPGRKVAIFAGGCFWGVEGVFSHVKGVTSVVSGYHGGEKK TASYDVVGTGRTGHAEAVRVTYDPAKVRYDQLLRIFFAVVTDPTQLNYQGPDDGTQYRNALVPMDKEQARVAAGYLAQLK RLDLWKRPIVTAVEPYKTFYPAEGYHQDFMANNPDHGYIRRWDAPKVQALKRMFPDLYKPAFTRN >Mature_225_residues MRRPVLAAALLAGIVTASCQQTAQAEGAVAAPEAAVQADEAPGRKVAIFAGGCFWGVEGVFSHVKGVTSVVSGYHGGEKK TASYDVVGTGRTGHAEAVRVTYDPAKVRYDQLLRIFFAVVTDPTQLNYQGPDDGTQYRNALVPMDKEQARVAAGYLAQLK RLDLWKRPIVTAVEPYKTFYPAEGYHQDFMANNPDHGYIRRWDAPKVQALKRMFPDLYKPAFTRN
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=159, Percent_Identity=39.622641509434, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI208609995, Length=159, Percent_Identity=39.622641509434, Blast_Score=114, Evalue=6e-26, Organism=Homo sapiens, GI208609993, Length=111, Percent_Identity=39.6396396396396, Blast_Score=81, Evalue=8e-16, Organism=Escherichia coli, GI1790665, Length=155, Percent_Identity=43.8709677419355, Blast_Score=123, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=35.5421686746988, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI24664627, Length=153, Percent_Identity=30.718954248366, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24664631, Length=153, Percent_Identity=30.0653594771242, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45553131, Length=145, Percent_Identity=31.0344827586207, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 24708; Mature: 24708
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPVLAAALLAGIVTASCQQTAQAEGAVAAPEAAVQADEAPGRKVAIFAGGCFWGVEGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHH FSHVKGVTSVVSGYHGGEKKTASYDVVGTGRTGHAEAVRVTYDPAKVRYDQLLRIFFAVV HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH TDPTQLNYQGPDDGTQYRNALVPMDKEQARVAAGYLAQLKRLDLWKRPIVTAVEPYKTFY CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCC PAEGYHQDFMANNPDHGYIRRWDAPKVQALKRMFPDLYKPAFTRN CCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRPVLAAALLAGIVTASCQQTAQAEGAVAAPEAAVQADEAPGRKVAIFAGGCFWGVEGV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHH FSHVKGVTSVVSGYHGGEKKTASYDVVGTGRTGHAEAVRVTYDPAKVRYDQLLRIFFAVV HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHH TDPTQLNYQGPDDGTQYRNALVPMDKEQARVAAGYLAQLKRLDLWKRPIVTAVEPYKTFY CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCC PAEGYHQDFMANNPDHGYIRRWDAPKVQALKRMFPDLYKPAFTRN CCCCCCHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]