| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is zur [C]
Identifier: 87198185
GI number: 87198185
Start: 156327
End: 156797
Strand: Direct
Name: zur [C]
Synonym: Saro_0159
Alternate gene names: 87198185
Gene position: 156327-156797 (Clockwise)
Preceding gene: 87198184
Following gene: 87198186
Centisome position: 4.39
GC content: 63.69
Gene sequence:
>471_bases ATGGCGGGGCATCACCATCATCATGATTTCGCGGGCGAGAAGCTGGTAAAGGCGGCGCGCGACGCGCTGGTCGAGGCCGG CGAGCAATGGACCGAGATGCGCGCCGATGTGTTCGAAGCCCTTGCCGCGCGCGACCGTCCGGCTTCCGCCTATGACATTG CCGAAGGTGTCGGCACCCGGCGGGGAAAGCGGGTTGCTGCCAATTCGGTCTATCGCATCCTTGATCTCTTCGTGCGCACC AACTTGGCGCGCAGGGTCGAAAGCGCGAATGCCTATGTCGCGAACAGCCATCCAGGTTGCCGCCACGACTGCATTTTCCT GATCTGCGACCTTTGCGGCAAGGCCGTGCACATCGATGACGATAGCCTGACCGGCGCGCTGCGGCAGGCGGCGCAGGGCG CGGGATTTGCCGAAGTGCGCCCAGTCGTTGAAATCCGCGGCCACTGTTCCGAGTGTGCAAGCGGAGAATGA
Upstream 100 bases:
>100_bases CAAGGTCCAGGCGCTCAAGCGCATGTTCCCCGATCTCTACAAGCCGGCCTTCACGCGGAACTGATTTGCGCATCCGCGCG GCGCTGCCTATCTAGAGGCC
Downstream 100 bases:
>100_bases AATCGACCGCGTAATGGGGGGGACGCAGCGTGGAACCGACATCATCCGAGCCGCGCCACTTGCCCACGAAGCGGCAATTC GCGGCAGTCATTTCCGGCAA
Product: transcriptional regulator
Products: NA
Alternate protein names: Zinc Uptake Regulation Protein; Fe2+/Zn2+ Uptake Regulation Protein; Transcriptional Regulator Fur Family; Ferric Uptake Regulator Fur Family; FUR Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Np; Zn Transport System Transcriptional Repressor; Fur Family Ferric Uptake Regulator; Ferric-Uptake Regulator; Zinc Uptake Regulator ZUR; Fur-Family Ferric Uptake Regulator; Fur Family Transcriptional Regulator; Fe2+/Zn2+ Uptake Regulation Protein-Like Protein; Zinc Uptake Transcriptional Regulator Fur Family; Ferric Uptake Regulation Protein; Ferric Uptake Regulator Fur Family Protein; Zinc Uptake Regulator Protein; Zinc Transporter-Like Regulatory Protein; Fe2+/Zn2+ Uptake Regulation Proteins; Regulator Protein; Regulatory Protein; Zinc-Uptake Regulator Zur; Transcriptional Regulator TrmB; Ferric Uptake Transcriptional Regulator; Zinc Transport-Related Regulatory Protein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MAGHHHHHDFAGEKLVKAARDALVEAGEQWTEMRADVFEALAARDRPASAYDIAEGVGTRRGKRVAANSVYRILDLFVRT NLARRVESANAYVANSHPGCRHDCIFLICDLCGKAVHIDDDSLTGALRQAAQGAGFAEVRPVVEIRGHCSECASGE
Sequences:
>Translated_156_residues MAGHHHHHDFAGEKLVKAARDALVEAGEQWTEMRADVFEALAARDRPASAYDIAEGVGTRRGKRVAANSVYRILDLFVRT NLARRVESANAYVANSHPGCRHDCIFLICDLCGKAVHIDDDSLTGALRQAAQGAGFAEVRPVVEIRGHCSECASGE >Mature_155_residues AGHHHHHDFAGEKLVKAARDALVEAGEQWTEMRADVFEALAARDRPASAYDIAEGVGTRRGKRVAANSVYRILDLFVRTN LARRVESANAYVANSHPGCRHDCIFLICDLCGKAVHIDDDSLTGALRQAAQGAGFAEVRPVVEIRGHCSECASGE
Specific function: Acts As A Negative Controlling Element, Employing Zn(2+) As A Cofactor To Bind The Operator Of The Repressed Genes (Znuacb). [C]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16922; Mature: 16791
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGHHHHHDFAGEKLVKAARDALVEAGEQWTEMRADVFEALAARDRPASAYDIAEGVGTR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC RGKRVAANSVYRILDLFVRTNLARRVESANAYVANSHPGCRHDCIFLICDLCGKAVHIDD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCEEECCC DSLTGALRQAAQGAGFAEVRPVVEIRGHCSECASGE HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure AGHHHHHDFAGEKLVKAARDALVEAGEQWTEMRADVFEALAARDRPASAYDIAEGVGTR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC RGKRVAANSVYRILDLFVRTNLARRVESANAYVANSHPGCRHDCIFLICDLCGKAVHIDD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCEEECCC DSLTGALRQAAQGAGFAEVRPVVEIRGHCSECASGE HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA