Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87198123

Identifier: 87198123

GI number: 87198123

Start: 98769

End: 100091

Strand: Direct

Name: 87198123

Synonym: Saro_0097

Alternate gene names: NA

Gene position: 98769-100091 (Clockwise)

Preceding gene: 87198121

Following gene: 87198124

Centisome position: 2.77

GC content: 67.95

Gene sequence:

>1323_bases
ATGACCGAAGGCCCGATCCGCCTGCCGAAAGAGCGCATGGCGCTGCTCTTTGCGGTCATGCTGGTCACGGCGGCGGGCAA
CACCGCGATGCAATCGGTCATGCCTTCGGTCGGCACCCGGCTCGGCATTGCCGACGTTTGGGTTAGCCTTGCCTATTCCT
GGTCGGCCCTGTTGTGGGTGATGATGGCACCGTACTGGGCACGCCGATCCGACCGTCGCGGCCGCAAGGCGATGATGGCT
CTGGGCGTGACCGGCTTCATCCTGTCCTTCGCCTTTTGCGGCGCCATCCTGCACTTCGGGCTCGATGGCTGGTTCGGCGC
GGGGCTGACCATGGCGCTCTTCGCGCTGGCCCGCTCGCTCTATGGCGGTTTCGGATCCGCCGCGCCCCCGGCTGTCCAGG
CCTATGTCGCCAGCCGCACCGGCCGCGCTGACCGAACCAAGGCGCTGTCCCTCGTCGCATCGAGCTTCGGACTCGGCACG
GTGCTGGGCCCCGCACTTGCCCCGCTGATGATTCTACCCGGACTTGGCCTTATCGGACCGTTTGCGGTGTTCGCCCTGTT
CGGCGTCATCGTCCTTGTCCTGTTGCGCATGCGCCTGCCCGACGACGATCCGCGCTTCGCCGCACGCGGTGAAGTCATGG
CGGCACCGTTCAGCGCATCGTCGAATCCGCGCATGGTCGAGGACCGGCCCGACGGATCGCCCGACGAACTGCCGGAAGCA
GAGCCTCTCCACCAGGGACCGGACCACTTGCGCTGGTCCGACAGGCGGCTGCGGCCATGGCTACTGGCCGGCCTGATCGG
CGGCCATGCGCAGGCCATGCTGCTGGGTGTGATCGGATTCCTGCTGCTCGACCGGCTGGGCCTGCGTGGCGATCCCGATG
CCGGCGCGGGACCGGTGGGCCTGGTTCTGATGGCTGGCGCCGTCGCGACGCTGCTGGCGCAGTGGGGATTGATCCCGATG
CTCGGGCTGGGACCACGCACCTCGACGCTGTGGGGCATGGGACTGGCGGCTGCGGGCGTGATTCCGGTGGCAATGGGCAA
CGACCTGCACACCATCGCGGTCGGCTTCGCCCTCGCATCGGTCGGTTTCGGGCTGTTCCGGCCGGGCTTCACGTCGGGCG
CGAGCCTGGCGGTCTCTCCGCGCGAGCAGGGACAGTCGGCGGGGATCGTGGCCTCGGTCAATGGCGCGGCCTATATCGGG
GCGCCTGCCATAGGCGTCTGGTTCTACAACCATTCGCAGTGGTTGGCCTGGGGTGCGATGGAAGTGCTTGCGCTTGGCGT
GGTGGCGCTGTGCCTCGTCGCCATGCAAAAGGATCCGGACTGA

Upstream 100 bases:

>100_bases
TGCCTTGGCGGTCGCAAATTTGCACCGTCATTGCAAGCATCCTGCGGCGGGCATAACTCTCCAGTATGAACCAGTCGTGG
ACAACGGAGGGATAGCAGCG

Downstream 100 bases:

>100_bases
ACCCTACATCGGCGATAGCCAATCGCGGGCTTGCCAATCACCGCTTTTGACGCCAAGCGCCTCTGCCATGGCCCCGTCGA
GCACTCCCCAGAAGGTCATC

Product: major facilitator transporter

Products: NA

Alternate protein names: Multidrug-Efflux Transporter; Facilitator Superfamily Protein; MFS Transporter; DrugH+ Antiporter-1 Family Protein; Multidrug Resistance Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter; Drug Efflux Permease

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MTEGPIRLPKERMALLFAVMLVTAAGNTAMQSVMPSVGTRLGIADVWVSLAYSWSALLWVMMAPYWARRSDRRGRKAMMA
LGVTGFILSFAFCGAILHFGLDGWFGAGLTMALFALARSLYGGFGSAAPPAVQAYVASRTGRADRTKALSLVASSFGLGT
VLGPALAPLMILPGLGLIGPFAVFALFGVIVLVLLRMRLPDDDPRFAARGEVMAAPFSASSNPRMVEDRPDGSPDELPEA
EPLHQGPDHLRWSDRRLRPWLLAGLIGGHAQAMLLGVIGFLLLDRLGLRGDPDAGAGPVGLVLMAGAVATLLAQWGLIPM
LGLGPRTSTLWGMGLAAAGVIPVAMGNDLHTIAVGFALASVGFGLFRPGFTSGASLAVSPREQGQSAGIVASVNGAAYIG
APAIGVWFYNHSQWLAWGAMEVLALGVVALCLVAMQKDPD

Sequences:

>Translated_440_residues
MTEGPIRLPKERMALLFAVMLVTAAGNTAMQSVMPSVGTRLGIADVWVSLAYSWSALLWVMMAPYWARRSDRRGRKAMMA
LGVTGFILSFAFCGAILHFGLDGWFGAGLTMALFALARSLYGGFGSAAPPAVQAYVASRTGRADRTKALSLVASSFGLGT
VLGPALAPLMILPGLGLIGPFAVFALFGVIVLVLLRMRLPDDDPRFAARGEVMAAPFSASSNPRMVEDRPDGSPDELPEA
EPLHQGPDHLRWSDRRLRPWLLAGLIGGHAQAMLLGVIGFLLLDRLGLRGDPDAGAGPVGLVLMAGAVATLLAQWGLIPM
LGLGPRTSTLWGMGLAAAGVIPVAMGNDLHTIAVGFALASVGFGLFRPGFTSGASLAVSPREQGQSAGIVASVNGAAYIG
APAIGVWFYNHSQWLAWGAMEVLALGVVALCLVAMQKDPD
>Mature_439_residues
TEGPIRLPKERMALLFAVMLVTAAGNTAMQSVMPSVGTRLGIADVWVSLAYSWSALLWVMMAPYWARRSDRRGRKAMMAL
GVTGFILSFAFCGAILHFGLDGWFGAGLTMALFALARSLYGGFGSAAPPAVQAYVASRTGRADRTKALSLVASSFGLGTV
LGPALAPLMILPGLGLIGPFAVFALFGVIVLVLLRMRLPDDDPRFAARGEVMAAPFSASSNPRMVEDRPDGSPDELPEAE
PLHQGPDHLRWSDRRLRPWLLAGLIGGHAQAMLLGVIGFLLLDRLGLRGDPDAGAGPVGLVLMAGAVATLLAQWGLIPML
GLGPRTSTLWGMGLAAAGVIPVAMGNDLHTIAVGFALASVGFGLFRPGFTSGASLAVSPREQGQSAGIVASVNGAAYIGA
PAIGVWFYNHSQWLAWGAMEVLALGVVALCLVAMQKDPD

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46042; Mature: 45911

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGPIRLPKERMALLFAVMLVTAAGNTAMQSVMPSVGTRLGIADVWVSLAYSWSALLWV
CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAPYWARRSDRRGRKAMMALGVTGFILSFAFCGAILHFGLDGWFGAGLTMALFALARSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YGGFGSAAPPAVQAYVASRTGRADRTKALSLVASSFGLGTVLGPALAPLMILPGLGLIGP
HCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHH
FAVFALFGVIVLVLLRMRLPDDDPRFAARGEVMAAPFSASSNPRMVEDRPDGSPDELPEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCCCCCEECCCCCCCCCCCCCC
EPLHQGPDHLRWSDRRLRPWLLAGLIGGHAQAMLLGVIGFLLLDRLGLRGDPDAGAGPVG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LVLMAGAVATLLAQWGLIPMLGLGPRTSTLWGMGLAAAGVIPVAMGNDLHTIAVGFALAS
HHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
VGFGLFRPGFTSGASLAVSPREQGQSAGIVASVNGAAYIGAPAIGVWFYNHSQWLAWGAM
HHHHHCCCCCCCCCCEEECCHHCCCCCCEEEECCCCEEECCCEEEEEEEECCHHHHHHHH
EVLALGVVALCLVAMQKDPD
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TEGPIRLPKERMALLFAVMLVTAAGNTAMQSVMPSVGTRLGIADVWVSLAYSWSALLWV
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAPYWARRSDRRGRKAMMALGVTGFILSFAFCGAILHFGLDGWFGAGLTMALFALARSL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YGGFGSAAPPAVQAYVASRTGRADRTKALSLVASSFGLGTVLGPALAPLMILPGLGLIGP
HCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHH
FAVFALFGVIVLVLLRMRLPDDDPRFAARGEVMAAPFSASSNPRMVEDRPDGSPDELPEA
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCCCCCCCCEECCCCCCCCCCCCCC
EPLHQGPDHLRWSDRRLRPWLLAGLIGGHAQAMLLGVIGFLLLDRLGLRGDPDAGAGPVG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
LVLMAGAVATLLAQWGLIPMLGLGPRTSTLWGMGLAAAGVIPVAMGNDLHTIAVGFALAS
HHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHH
VGFGLFRPGFTSGASLAVSPREQGQSAGIVASVNGAAYIGAPAIGVWFYNHSQWLAWGAM
HHHHHCCCCCCCCCCEEECCHHCCCCCCEEEECCCCEEECCCEEEEEEEECCHHHHHHHH
EVLALGVVALCLVAMQKDPD
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA