| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198121
Identifier: 87198121
GI number: 87198121
Start: 97182
End: 98003
Strand: Direct
Name: 87198121
Synonym: Saro_0095
Alternate gene names: NA
Gene position: 97182-98003 (Clockwise)
Preceding gene: 87198118
Following gene: 87198123
Centisome position: 2.73
GC content: 64.72
Gene sequence:
>822_bases ATGATGCCTCGTCTCGACAGCAGTCTCGCCTGGAAGACCGCGACACGCCTTGTCGCCACCAACCGCGACGTGCTGATGGC GATTGCGGGGGTGTTCTTCCTGCTGCCCGGCCTTGCCTTCTCGGTCTTCGTGCCCGAGCCGCAGATGGCTCCGGGCACGC CGCCCGGCGAGATGATGGAGATCATGGCCGAAGCCTGGACTTCGTCGCTGCCGTTGCTGATCGTGGTGACCCTTCTGCAG ATGGCGGGCACGGTTACGGTGCTGATCGTGATGACCGATCCGGCACGTCCGACCGTCGCGCAATCGATCCGGCGGGGATT CATGGCACTGGTGCCCTATGTGCTGGCGCAGGTCATGGTGGGCGGCGCACTCGGCATGGGATTTCTCGTGCTGGTGAGCG CGGCGGCACTTACCGGCGTTCAGGCGATCGGCGCGATCGCGATCCTTGCTGCATTCCTGGCCATGGTCTGGTGCAGCCTG CGCATGGCGCTGGTCGCTCCGGTCCTGGCAATCGAGGCGGAGCGCAACCCCGTGGCGGCGCTGCGACGCTCGTGGCAGCT GACGCGCGGCAATTCCGGCCGGATGCTGGCGTTCTTCTTCCTCGCCGGACTGCTTTTCGCGGTGGTCTATGGCCTGGCGA TGATGTTGGTGGGCGTGGTGCTGGTGCTTACGACCGGCGGAAGCGTGCAACACGTTCTCAACGCCGCGGTATCAAGCGCG ATCACTTCGGGCGCTCTGGTCTATTTCATCGCGATGCTGGCGGCGGTCTACAGGCAGTTCGCGGGGCCGCCGAAGGAAGA GATGATCCAGATCTTCGAATAA
Upstream 100 bases:
>100_bases TCGATGGTTTCGCTTGCAGCCATGCCTTGCGAATGGCGCGGACCGGTCCGCTATTCAAGGGGGTTCGACAATGGCGGGTC GTGGCTGCTAGTAAGCCCGA
Downstream 100 bases:
>100_bases GGTCGGCCTTATTCCTTCCAGCCCCAACTGATCACGCAGGGCGGCACGTTGAGCGGTTCGAAGCCCTTGTCGATGTGACG GAAGAACTGCCCCATGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE
Sequences:
>Translated_273_residues MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE >Mature_273_residues MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMMEIMAEAWTSSLPLLIVVTLLQ MAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMVGGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSL RMALVAPVLAIEAERNPVAALRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28918; Mature: 28918
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMME CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHH IMAEAWTSSLPLLIVVTLLQMAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMV HHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSLRMALVAPVLAIEAERNPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MMPRLDSSLAWKTATRLVATNRDVLMAIAGVFFLLPGLAFSVFVPEPQMAPGTPPGEMME CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHH IMAEAWTSSLPLLIVVTLLQMAGTVTVLIVMTDPARPTVAQSIRRGFMALVPYVLAQVMV HHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH GGALGMGFLVLVSAAALTGVQAIGAIAILAAFLAMVWCSLRMALVAPVLAIEAERNPVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LRRSWQLTRGNSGRMLAFFFLAGLLFAVVYGLAMMLVGVVLVLTTGGSVQHVLNAAVSSA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ITSGALVYFIAMLAAVYRQFAGPPKEEMIQIFE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA