| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751787
Identifier: 86751787
GI number: 86751787
Start: 5305794
End: 5306186
Strand: Direct
Name: 86751787
Synonym: RPB_4689
Alternate gene names: NA
Gene position: 5305794-5306186 (Clockwise)
Preceding gene: 86751786
Following gene: 86751797
Centisome position: 99.51
GC content: 63.87
Gene sequence:
>393_bases ATGTTTCACTACACCACGATCGCGACCCTGCTGGCGTTGATGTTCTATTTCTACACTTCGGTGAACGTCGCCCGCGCGCG AATGCTCTACGGCGTCAAGGCGCCGGCGATCTCCGGCCATCCCGATTTCGAACGCGTCTTCCGGGTGCAGGCCAACACGC TGGAATGGATGCCGATCTTCCTGCCGTCGCTGTGGCTGTTCGCGTATTATCTCAGCGACGCCTTCGCCGCCGCGATCGGC GGCGTCTGGATCATCGGCCGGGTGATGTACATGATCGGCTATGCGGATGCGGCGCCGAAGCGCGGCGCCGGTTTCGCGGT GCAGATGGTCGCCGCCGCGGCCTTGTGGGGCGGCGCGGTCTACGGCGTCGTGCATCAGATGCTGGGGAAGTAA
Upstream 100 bases:
>100_bases CGGCAACGGATATCTTGAGATGACCGGCTATTGAGTTCAAGCTGGCGGCAACCGGCGGCTTCAGCCGGACAGAATGAATC ATATCGTTGGGAGCCCTGGG
Downstream 100 bases:
>100_bases AAACCTCTGCACGTCATTGCGAGCGAAGCGAAGCAATCCAGAGGCCGCATGTGCTGCATTGGATTGCTTCGTCGCTTCGC TCCTCGCAATGACGGCTCCC
Product: membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK
Sequences:
>Translated_130_residues MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK >Mature_130_residues MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIFLPSLWLFAYYLSDAFAAAIG GVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAVYGVVHQMLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MAPEG family [H]
Homologues:
Organism=Homo sapiens, GI4505181, Length=88, Percent_Identity=46.5909090909091, Blast_Score=92, Evalue=1e-19, Organism=Homo sapiens, GI22035629, Length=95, Percent_Identity=38.9473684210526, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001129 [H]
Pfam domain/function: PF01124 MAPEG [H]
EC number: NA
Molecular weight: Translated: 14369; Mature: 14369
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH LPSLWLFAYYLSDAFAAAIGGVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH YGVVHQMLGK HHHHHHHHCC >Mature Secondary Structure MFHYTTIATLLALMFYFYTSVNVARARMLYGVKAPAISGHPDFERVFRVQANTLEWMPIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHH LPSLWLFAYYLSDAFAAAIGGVWIIGRVMYMIGYADAAPKRGAGFAVQMVAAAALWGGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH YGVVHQMLGK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]