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The map label for this gene is yccF [H]

Identifier: 86751750

GI number: 86751750

Start: 5261616

End: 5262020

Strand: Direct

Name: yccF [H]

Synonym: RPB_4652

Alternate gene names: 86751750

Gene position: 5261616-5262020 (Clockwise)

Preceding gene: 86751748

Following gene: 86751755

Centisome position: 98.69

GC content: 64.69

Gene sequence:

>405_bases
ATGTCGCCGGTCTCTCTGCTTCTCAACATTCTCTGGATCGCACTCGGCGGCTTCTGGATGGCGGCAGGCTGGGCGATCGC
CGCGATCATTATGGCAATCACGATCATCGGGCTGCCATGGGCGCGGGCGTCCTTCAGCATCGCCGCCTATACGCTGTTTC
CGTTCGGCCAGATGGCGGTGCCGCGCGAAACCGTGACAGGGCGCGAGGATGTCGGCACCGGCCCGCTGGGTCTGCTCGGC
AATATCATCTGGTTGGTTTTCGCCGGCTGGTGGCTGGCGCTCGGGCACCTGATCACCGCGATCCTGCTCGCGGTGACCAT
CATCGGCATCCCGTTCGCCTGGGCGCACGTGAAGCTCGCCGGAATCGCGCTCTGGCCGATCGGCAAGGAAATCGTTCCGG
CGTGA

Upstream 100 bases:

>100_bases
GCTTCGCTGTATCGATGCCCGCAGATGGACTGGACGATGTCCCTGCGAATAGGCGACACTCGCGCGCAACATCCACCGCC
CGCCCCGAAAGAACCGCCAG

Downstream 100 bases:

>100_bases
ACCCGGCCCGGACCGGCCAGCGGGTCGGCGCACACCGGACGCATGCCAGGCTACGCCGCACCGCCACGCCCGCCTCCTGC
CCGGCAACGCAGCGTTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSPVSLLLNILWIALGGFWMAAGWAIAAIIMAITIIGLPWARASFSIAAYTLFPFGQMAVPRETVTGREDVGTGPLGLLG
NIIWLVFAGWWLALGHLITAILLAVTIIGIPFAWAHVKLAGIALWPIGKEIVPA

Sequences:

>Translated_134_residues
MSPVSLLLNILWIALGGFWMAAGWAIAAIIMAITIIGLPWARASFSIAAYTLFPFGQMAVPRETVTGREDVGTGPLGLLG
NIIWLVFAGWWLALGHLITAILLAVTIIGIPFAWAHVKLAGIALWPIGKEIVPA
>Mature_133_residues
SPVSLLLNILWIALGGFWMAAGWAIAAIIMAITIIGLPWARASFSIAAYTLFPFGQMAVPRETVTGREDVGTGPLGLLGN
IIWLVFAGWWLALGHLITAILLAVTIIGIPFAWAHVKLAGIALWPIGKEIVPA

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=127, Percent_Identity=39.3700787401575, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 14284; Mature: 14153

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVSLLLNILWIALGGFWMAAGWAIAAIIMAITIIGLPWARASFSIAAYTLFPFGQMAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PRETVTGREDVGTGPLGLLGNIIWLVFAGWWLALGHLITAILLAVTIIGIPFAWAHVKLA
CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIALWPIGKEIVPA
HEEECCCCHHHCCC
>Mature Secondary Structure 
SPVSLLLNILWIALGGFWMAAGWAIAAIIMAITIIGLPWARASFSIAAYTLFPFGQMAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PRETVTGREDVGTGPLGLLGNIIWLVFAGWWLALGHLITAILLAVTIIGIPFAWAHVKLA
CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIALWPIGKEIVPA
HEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]