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The map label for this gene is 86751738

Identifier: 86751738

GI number: 86751738

Start: 5245030

End: 5245377

Strand: Direct

Name: 86751738

Synonym: RPB_4640

Alternate gene names: NA

Gene position: 5245030-5245377 (Clockwise)

Preceding gene: 86751737

Following gene: 86751739

Centisome position: 98.38

GC content: 64.94

Gene sequence:

>348_bases
GTGATGTCGCACGGCTGGATCCGTCTGCTGGCGACCATCCTTCTGATCGTCGCGGTGCTGCTGGTGATCCGGCTGCACCG
CGCCGAAGGAGCGACCTTGCCGGAAGCCGTCACCGCCGGACATCGGCTGGCGGTGAACTGGTGCAAGGAATGCCACGCCG
TCGAGCGCAACGACGTGCTCAGCGGCAAGGGGCCGGCATTCGTGCGCATCGCGAACATGCCGTCGACCACCGAATTGTCG
CTCAAGGTGTTCCTGCGGTCGAACCACTCCGACATGCCGAATCTCGTCATCGCGCCCAGCGAGGCCGACGAGATCGTGCG
CTACATCCTCAGCCTCAAGCGCGACTGA

Upstream 100 bases:

>100_bases
CGCAGCACTACCAGGCCTATTGCGCCAACAAGGTCACGCTCGACGCGCTGGCGGAAGAGCTGGCGAATACCCCGCCTCTG
TCCGCCCGTCACTGACTGCC

Downstream 100 bases:

>100_bases
TGCGTCGCGCGGGACGCTGCGGACATTCCCCGCCATCCGCCCCGCCGCGCCGCGGCCCATCCTGCTGAAGGCCGCGCCAT
GGATTTCGACGACAGCGACA

Product: putative cytochrome c552 precursor

Products: NA

Alternate protein names: Cytochrome C; Cytochrome C Class I

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MMSHGWIRLLATILLIVAVLLVIRLHRAEGATLPEAVTAGHRLAVNWCKECHAVERNDVLSGKGPAFVRIANMPSTTELS
LKVFLRSNHSDMPNLVIAPSEADEIVRYILSLKRD

Sequences:

>Translated_115_residues
MMSHGWIRLLATILLIVAVLLVIRLHRAEGATLPEAVTAGHRLAVNWCKECHAVERNDVLSGKGPAFVRIANMPSTTELS
LKVFLRSNHSDMPNLVIAPSEADEIVRYILSLKRD
>Mature_115_residues
MMSHGWIRLLATILLIVAVLLVIRLHRAEGATLPEAVTAGHRLAVNWCKECHAVERNDVLSGKGPAFVRIANMPSTTELS
LKVFLRSNHSDMPNLVIAPSEADEIVRYILSLKRD

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12750; Mature: 12750

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSHGWIRLLATILLIVAVLLVIRLHRAEGATLPEAVTAGHRLAVNWCKECHAVERNDVL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC
SGKGPAFVRIANMPSTTELSLKVFLRSNHSDMPNLVIAPSEADEIVRYILSLKRD
CCCCCEEEEECCCCCCCHHEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSHGWIRLLATILLIVAVLLVIRLHRAEGATLPEAVTAGHRLAVNWCKECHAVERNDVL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCC
SGKGPAFVRIANMPSTTELSLKVFLRSNHSDMPNLVIAPSEADEIVRYILSLKRD
CCCCCEEEEECCCCCCCHHEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA