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The map label for this gene is 86751725

Identifier: 86751725

GI number: 86751725

Start: 5228040

End: 5229779

Strand: Direct

Name: 86751725

Synonym: RPB_4627

Alternate gene names: NA

Gene position: 5228040-5229779 (Clockwise)

Preceding gene: 86751723

Following gene: 86751726

Centisome position: 98.06

GC content: 66.61

Gene sequence:

>1740_bases
ATGGACAAGTTGAAGATGGCCGGCGCGGCCTACCGCGCGCTGACCGCCCGCAAACAGGCGCCGTCGCTCTACGACCTGTG
CGACCCGGTCTTCCTCGGCCGCAAGCACGGGGATCCGCACATCGCTAAATTCTACCGGACGGCGCTCGGCAATCCGGCGC
TGCGCCCCTTGTTGCGCAAGGCCGGCCTGCCGGAGCTGAATGACCCGGTCCGGTTCCGCGCCATCCGCGACGCGTTGATC
GCGGCGCGAGACGAGGCCGATCCGGATTGGACCGCGATCGGCCGTCCGATCGCCGAACTGATCGACAGCGTCCAATTGCA
GCATCCGCGCCCGCCTGCCTCCATCGCGCCGACCCAAATGCCTCGGCTCGCCGACATCGACAGCGCGATCCGGGCCACGA
GCGACCATCTGCTGCGGTCGTGGGAACACAACGGCTTCATTCCGACCTACGCCGCCTTCAACCTGATCGGCGATCCGGAT
TTCGGCAGCCCGGCGTTCCTCGCGGCGCTCACCGGGCTGAATGCGCGCAGCTACAAGAATTCGACGCTGCTGTTCAATCT
GGCGCGGGTGTTCATCGCCCGATCGCCGGCCGCGGGATTGATCAACCCGCCGTGGCGCGGCATCGCCGAGCCGATCTGGG
CGCCGGTGCAAATCCGGCATCGCTCGGCCTATTACGACGCCTTCTACGTCGAAGCGCTGCTGAGCTTCATCGAAACCGGA
CTCGGCACGCCCGAAGACGTTCGGGCGGCCCGCCGGATCGTCGCCGACATGGTCCAGTTCTGCATCGAGACCAGCCGCGA
ACGCGTGCGGTCGGCGGAGGGCGAGAGCTTCGATGTGATCACGGCGCTGGCGCCGCCGCCGCATCCTCGCTTCAGCCGTT
TCTTCACCCAGATCAAGCAGAACCTCGGCTTCGGCGTCTACGTCCCCGACTGCGACACCACCGCCTGCGCGATCTCGGCC
GCCACCCAGGCCAATTCCACCGATCCGATCCTGGACCGGCCGCTGATCGATTTCTACGCTGGCTATCAGGTGCGAGCCGG
AGCCAACGAACCGCTGGTCACCGTCCCGCTCAACGACAACGTCGACTATGAGGGCGGCATCGCCACCTGGATCGACAGCA
TTTCCGGCGAGCGGCCGTTCGGCAACGACCTCGATCCGACGCTCAATCTCGACGTGCTCGAAGTCAGCTTCCGCAACTGC
GCGCGCTGGGCCATCGTCGAGACGCCGTCGCGCCTGGACACGGTGCGACGGATCGTCGATTTCCAGCGCCGGCTGGTGGC
GAGCGGCGCCTTCGCCGAGCCGAAATCGCACGTCTACTATCTGCCCGAACTGTATTGCGCCTATTTCGGCCGCTGCTACG
CCTCCTTCCGCGCCCTCGACGAAGGTGCCAGACGCGCGATCGATCCTGACGGCGTGTTCGAATTCATCCGCGAGCGCGTC
CTGGCCTATGTCGCGGACGAACTGGTGGCGAAGGAGATGAACGTGTTCGACGCCGCGCTGGCGCTGATCGCGCTCGGCCA
TCTCGACGGCGACCTCGCGCACTTCACGCCGGCGCTGCATTGCGTCCTCAATCACCTCGGCGAGGGCGGGCGGCGCGGCC
CGTTCAAGGCCTATGAATGGAATAAGATGAAAACCCCGACCCGCATCCTGGTCGGCGGACCGGAGGTCACCTCGGCCTTC
GTGCTGATGGGGCTGGCGCTGGCGCGCAAGGCGATCCTGCAGCGCCCACGCAACGGCTGA

Upstream 100 bases:

>100_bases
ACCGCCAGGGCTGTTCGCCCCGCCGGCCGCCGATTTGTCAATCGGACCGATCCGTGCGAGTTCTCAATGGCTTGACGGTT
CGGAACGGCGGGACGAAGGC

Downstream 100 bases:

>100_bases
AGCAGAGCCGACGGACTCTCGCGCCGAGTTGAAGCCTCTGTCCGCGCATCGCGCTGGCCCGACCGTCAAATAACCATCAC
AATCGGCAGACCTTGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MDKLKMAGAAYRALTARKQAPSLYDLCDPVFLGRKHGDPHIAKFYRTALGNPALRPLLRKAGLPELNDPVRFRAIRDALI
AARDEADPDWTAIGRPIAELIDSVQLQHPRPPASIAPTQMPRLADIDSAIRATSDHLLRSWEHNGFIPTYAAFNLIGDPD
FGSPAFLAALTGLNARSYKNSTLLFNLARVFIARSPAAGLINPPWRGIAEPIWAPVQIRHRSAYYDAFYVEALLSFIETG
LGTPEDVRAARRIVADMVQFCIETSRERVRSAEGESFDVITALAPPPHPRFSRFFTQIKQNLGFGVYVPDCDTTACAISA
ATQANSTDPILDRPLIDFYAGYQVRAGANEPLVTVPLNDNVDYEGGIATWIDSISGERPFGNDLDPTLNLDVLEVSFRNC
ARWAIVETPSRLDTVRRIVDFQRRLVASGAFAEPKSHVYYLPELYCAYFGRCYASFRALDEGARRAIDPDGVFEFIRERV
LAYVADELVAKEMNVFDAALALIALGHLDGDLAHFTPALHCVLNHLGEGGRRGPFKAYEWNKMKTPTRILVGGPEVTSAF
VLMGLALARKAILQRPRNG

Sequences:

>Translated_579_residues
MDKLKMAGAAYRALTARKQAPSLYDLCDPVFLGRKHGDPHIAKFYRTALGNPALRPLLRKAGLPELNDPVRFRAIRDALI
AARDEADPDWTAIGRPIAELIDSVQLQHPRPPASIAPTQMPRLADIDSAIRATSDHLLRSWEHNGFIPTYAAFNLIGDPD
FGSPAFLAALTGLNARSYKNSTLLFNLARVFIARSPAAGLINPPWRGIAEPIWAPVQIRHRSAYYDAFYVEALLSFIETG
LGTPEDVRAARRIVADMVQFCIETSRERVRSAEGESFDVITALAPPPHPRFSRFFTQIKQNLGFGVYVPDCDTTACAISA
ATQANSTDPILDRPLIDFYAGYQVRAGANEPLVTVPLNDNVDYEGGIATWIDSISGERPFGNDLDPTLNLDVLEVSFRNC
ARWAIVETPSRLDTVRRIVDFQRRLVASGAFAEPKSHVYYLPELYCAYFGRCYASFRALDEGARRAIDPDGVFEFIRERV
LAYVADELVAKEMNVFDAALALIALGHLDGDLAHFTPALHCVLNHLGEGGRRGPFKAYEWNKMKTPTRILVGGPEVTSAF
VLMGLALARKAILQRPRNG
>Mature_579_residues
MDKLKMAGAAYRALTARKQAPSLYDLCDPVFLGRKHGDPHIAKFYRTALGNPALRPLLRKAGLPELNDPVRFRAIRDALI
AARDEADPDWTAIGRPIAELIDSVQLQHPRPPASIAPTQMPRLADIDSAIRATSDHLLRSWEHNGFIPTYAAFNLIGDPD
FGSPAFLAALTGLNARSYKNSTLLFNLARVFIARSPAAGLINPPWRGIAEPIWAPVQIRHRSAYYDAFYVEALLSFIETG
LGTPEDVRAARRIVADMVQFCIETSRERVRSAEGESFDVITALAPPPHPRFSRFFTQIKQNLGFGVYVPDCDTTACAISA
ATQANSTDPILDRPLIDFYAGYQVRAGANEPLVTVPLNDNVDYEGGIATWIDSISGERPFGNDLDPTLNLDVLEVSFRNC
ARWAIVETPSRLDTVRRIVDFQRRLVASGAFAEPKSHVYYLPELYCAYFGRCYASFRALDEGARRAIDPDGVFEFIRERV
LAYVADELVAKEMNVFDAALALIALGHLDGDLAHFTPALHCVLNHLGEGGRRGPFKAYEWNKMKTPTRILVGGPEVTSAF
VLMGLALARKAILQRPRNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64045; Mature: 64045

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLKMAGAAYRALTARKQAPSLYDLCDPVFLGRKHGDPHIAKFYRTALGNPALRPLLRK
CCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AGLPELNDPVRFRAIRDALIAARDEADPDWTAIGRPIAELIDSVQLQHPRPPASIAPTQM
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PRLADIDSAIRATSDHLLRSWEHNGFIPTYAAFNLIGDPDFGSPAFLAALTGLNARSYKN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCC
STLLFNLARVFIARSPAAGLINPPWRGIAEPIWAPVQIRHRSAYYDAFYVEALLSFIETG
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHC
LGTPEDVRAARRIVADMVQFCIETSRERVRSAEGESFDVITALAPPPHPRFSRFFTQIKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
NLGFGVYVPDCDTTACAISAATQANSTDPILDRPLIDFYAGYQVRAGANEPLVTVPLNDN
HCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEECCCC
VDYEGGIATWIDSISGERPFGNDLDPTLNLDVLEVSFRNCARWAIVETPSRLDTVRRIVD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCHHHHHHHHHHH
FQRRLVASGAFAEPKSHVYYLPELYCAYFGRCYASFRALDEGARRAIDPDGVFEFIRERV
HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAYVADELVAKEMNVFDAALALIALGHLDGDLAHFTPALHCVLNHLGEGGRRGPFKAYEW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NKMKTPTRILVGGPEVTSAFVLMGLALARKAILQRPRNG
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKLKMAGAAYRALTARKQAPSLYDLCDPVFLGRKHGDPHIAKFYRTALGNPALRPLLRK
CCCHHHHHHHHHHHHHHHCCCCHHHHHCHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AGLPELNDPVRFRAIRDALIAARDEADPDWTAIGRPIAELIDSVQLQHPRPPASIAPTQM
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PRLADIDSAIRATSDHLLRSWEHNGFIPTYAAFNLIGDPDFGSPAFLAALTGLNARSYKN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCHHHHHHHHCCCCCCCCC
STLLFNLARVFIARSPAAGLINPPWRGIAEPIWAPVQIRHRSAYYDAFYVEALLSFIETG
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHC
LGTPEDVRAARRIVADMVQFCIETSRERVRSAEGESFDVITALAPPPHPRFSRFFTQIKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
NLGFGVYVPDCDTTACAISAATQANSTDPILDRPLIDFYAGYQVRAGANEPLVTVPLNDN
HCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEECCCC
VDYEGGIATWIDSISGERPFGNDLDPTLNLDVLEVSFRNCARWAIVETPSRLDTVRRIVD
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCHHHHHHHHHHH
FQRRLVASGAFAEPKSHVYYLPELYCAYFGRCYASFRALDEGARRAIDPDGVFEFIRERV
HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAYVADELVAKEMNVFDAALALIALGHLDGDLAHFTPALHCVLNHLGEGGRRGPFKAYEW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NKMKTPTRILVGGPEVTSAFVLMGLALARKAILQRPRNG
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA