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The map label for this gene is 86751726

Identifier: 86751726

GI number: 86751726

Start: 5229937

End: 5230665

Strand: Direct

Name: 86751726

Synonym: RPB_4628

Alternate gene names: NA

Gene position: 5229937-5230665 (Clockwise)

Preceding gene: 86751725

Following gene: 86751727

Centisome position: 98.09

GC content: 67.22

Gene sequence:

>729_bases
ATGCTGAAGACCTTCCTGCTTCCGCTCTGTCTCGTCCTGCTGTTGCCGGTGACGGCGCAGGCTGCCGACGTCACCGGCGT
TCCGAAGATCCGCGACGGCGATCATGTCACGATCGGCGGCGCCCGTATCCGGCTGGCGGGCATCGACGCGCCTTCACTCG
ATCAGCTGTGCCTCAACCCCAAGGGCGAGCGATGGACCTGCGGCGTCGCCGCGCGCGACGCGCTGGCGGCCCACGTCGGC
GGCAAGAGCTGGACCTGCCGCGTTACGCGCACGGAGAAGAACGGCCTTTCGATCGCGAAATGCGAGGTCGACGGCGAGGA
CATCCAGCAATGGATGGTCAAGAACGGCTGGGCGCTGTCTTACGTTCGCGTCGCGCGCACCTATGACGCCGACGAGAAAC
TGGCGCGCGCGGCACGCGCCGGATTGTGGCAGGGCGCGTTCATCGCGCCGTGGGACTGGCGGGTGCGCAACAGCAAGACC
GCCGTTCTCGGCGCGACCAGGCCGCCGAAGAATGCGCGCCGAATTCTGCTCGCCTCGGCCTCCGGCCCCGTCGCGCCGTC
ACCAGACTGCACCATCAAGGGCAACGTCAACACGGCGGGCGAGTGCATCTATCACAAGCCGACCAGCCGCTGGTATGCCA
AGATCAAGATGACGATCAGCAAGGGGACGCGCTGGTTCTGCTCGGTCGAAGAAGCCGAAGCCGCCGGCTGCCGCGAGACC
CGACGCTGA

Upstream 100 bases:

>100_bases
CCCGACCGTCAAATAACCATCACAATCGGCAGACCTTGCTCCATCGACCCGGCACGCTGGCGCACCAGCCGTGAACATCC
CGATCGAGATCGGCCAACCC

Downstream 100 bases:

>100_bases
CCCGGCCCACTCGCGCCCTGGTCGCTTGAATTCGATCGCGCGCGGCGGCAAGGTTCCGCAGCATTTCAATCTCCAGAGGA
CAGCATCATGGCCGTCAGCG

Product: SNase-like nuclease

Products: NA

Alternate protein names: Succinoglycan Biosynthesis Protein; Nuclease-Like Protein; Succinoglycan Biosynthesis Protein ExoI; Nuclease Domain Protein; SNase-Like Nuclease; Excalibur Domain Protein; Signal Peptide; Rare Lipoprotein A; Nuclease Family Protein; Exopolysaccharide Biosynthesis Protein; Micrococcal Nuclease; Excalibur; Excalibur Domain-Containing Protein; Succinoglycan Biotynthesis Protein ExoI; Nuclease-Related Protein; Nuclease Protein; Periplasmic Protein; Succinoglycan Biosynthesis Protein EXOI

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MLKTFLLPLCLVLLLPVTAQAADVTGVPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNPKGERWTCGVAARDALAAHVG
GKSWTCRVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALSYVRVARTYDADEKLARAARAGLWQGAFIAPWDWRVRNSKT
AVLGATRPPKNARRILLASASGPVAPSPDCTIKGNVNTAGECIYHKPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRET
RR

Sequences:

>Translated_242_residues
MLKTFLLPLCLVLLLPVTAQAADVTGVPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNPKGERWTCGVAARDALAAHVG
GKSWTCRVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALSYVRVARTYDADEKLARAARAGLWQGAFIAPWDWRVRNSKT
AVLGATRPPKNARRILLASASGPVAPSPDCTIKGNVNTAGECIYHKPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRET
RR
>Mature_242_residues
MLKTFLLPLCLVLLLPVTAQAADVTGVPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNPKGERWTCGVAARDALAAHVG
GKSWTCRVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALSYVRVARTYDADEKLARAARAGLWQGAFIAPWDWRVRNSKT
AVLGATRPPKNARRILLASASGPVAPSPDCTIKGNVNTAGECIYHKPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRET
RR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26400; Mature: 26400

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTFLLPLCLVLLLPVTAQAADVTGVPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHCCC
KGERWTCGVAARDALAAHVGGKSWTCRVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALS
CCCEEEECHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCEEE
YVRVARTYDADEKLARAARAGLWQGAFIAPWDWRVRNSKTAVLGATRPPKNARRILLASA
EEEEECCCCHHHHHHHHHHCCCCCCCEECCCCEEECCCCEEEEECCCCCCCCEEEEEEEC
SGPVAPSPDCTIKGNVNTAGECIYHKPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRET
CCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECHHHCCCCHHC
RR
CC
>Mature Secondary Structure
MLKTFLLPLCLVLLLPVTAQAADVTGVPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHCCC
KGERWTCGVAARDALAAHVGGKSWTCRVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALS
CCCEEEECHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCEEE
YVRVARTYDADEKLARAARAGLWQGAFIAPWDWRVRNSKTAVLGATRPPKNARRILLASA
EEEEECCCCHHHHHHHHHHCCCCCCCEECCCCEEECCCCEEEEECCCCCCCCEEEEEEEC
SGPVAPSPDCTIKGNVNTAGECIYHKPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRET
CCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCEEEEEECHHHCCCCHHC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA