| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751660
Identifier: 86751660
GI number: 86751660
Start: 5157698
End: 5158762
Strand: Direct
Name: 86751660
Synonym: RPB_4562
Alternate gene names: NA
Gene position: 5157698-5158762 (Clockwise)
Preceding gene: 86751659
Following gene: 86751661
Centisome position: 96.74
GC content: 64.98
Gene sequence:
>1065_bases ATGCATAAGAAGACCGACACCGCCGACAAACCCCACGACGATCTGCGCTTTCTGCTGGAGAGCCACCCCGGACCCGACCA GGTCGTCGACATCGCCCCGGGCGTGCTGTGGCTGCGGCTGAAGCTGCCGTTCCGCCTCAACCACGTGAACATCTATCTGC TCGCCGATGGCGACGGCTGGGCGATGGTCGACACCGGCTTCGGCAACGACACCACGATCGCGGCCTGGGAAACGCTGTTC GACGGCGCGCTCAAAGGCTTCGCCATCAGCCGCGTGATCGTGACCCACGCCCACCCCGACCATTTCGGCCAGGCCGGCTG GATCGTGCAGCGGTTCCGCTGCCCGTTCTACATGTCGCAGATCGAATATCTGCAGGGCGTCTATCATCAGAACCGCCGCA GCGAGGAGCGGCTCGTCAATTCGCGCGAGTTCTTCCACCGCCACGGCATGGACGACTCCATCACCGCGCAATTGCTCGGC CGCGGTCAGGACTATCTGAAGCGCGCGGTGCCGCTTCCGGCGGCGTATCGACGACTCACCAAGGGCGACCACATCCGGAT CGGCACACGGACGTTTCGCATCATCACCGGCGCCGGCCACTCGCCCGATCAGGTGATGCTGTATTGCGCCGCCGACAAGC TGTTTCTCTCCGCCGATCAGGTGCTGAGCAAGATCTCCCCCAATGTCAGCGTCTGGGCGCACGAGCCGGACGAAGACGCG CTCGGCTCCTATCTGAAATCACTCGCCGAACTGACCACGCTGCTACCGGACGATGTGCTGGTGCTGCCGGGTCACGGCCT GCCCTTCCACGGCGTCAAGACCCGTATCAAGCAGCTCGCCGATCATCACGAGGAACGCTGCGGCGTGATCGCGGAGGCCT GCCGCGACCGGGCGATGAGTTCCGCCGAGCTGGTGCCGGTGGTGTTCCACAAGCACGTGCTGGATGCGCACCAGACCGGC TTTGCGGCCGGCGAACTGATCGCGCATGTCAACTACATGCTGGCGCGCAACCGCCTGACGATCGTCGACAAGGCCGACGG CATCCTGCGCTTCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases ACGGCCGGTCCAACCGGCGATTGCGCAACCCGCTCCAGCGGTTTTTCGGCTGGCGCCGCTGGTCCGGTCCCGCTAAGGCG ATAGTGGGAGCCTGCGCCAC
Downstream 100 bases:
>100_bases GCCCGGCCGCGAAGCGGGACGGTGACCTCGGCCAATGCATTGATCTTCATCAAGCTTTGACCTGCGCGGGGAGCTGTTAG GCACGCCTCCGGCGCAGCCA
Product: Beta-lactamase-like
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase Domain Protein; Metallo-Dependent Enzymatic Protein; Zinc Metallohydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MHKKTDTADKPHDDLRFLLESHPGPDQVVDIAPGVLWLRLKLPFRLNHVNIYLLADGDGWAMVDTGFGNDTTIAAWETLF DGALKGFAISRVIVTHAHPDHFGQAGWIVQRFRCPFYMSQIEYLQGVYHQNRRSEERLVNSREFFHRHGMDDSITAQLLG RGQDYLKRAVPLPAAYRRLTKGDHIRIGTRTFRIITGAGHSPDQVMLYCAADKLFLSADQVLSKISPNVSVWAHEPDEDA LGSYLKSLAELTTLLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGVIAEACRDRAMSSAELVPVVFHKHVLDAHQTG FAAGELIAHVNYMLARNRLTIVDKADGILRFAAA
Sequences:
>Translated_354_residues MHKKTDTADKPHDDLRFLLESHPGPDQVVDIAPGVLWLRLKLPFRLNHVNIYLLADGDGWAMVDTGFGNDTTIAAWETLF DGALKGFAISRVIVTHAHPDHFGQAGWIVQRFRCPFYMSQIEYLQGVYHQNRRSEERLVNSREFFHRHGMDDSITAQLLG RGQDYLKRAVPLPAAYRRLTKGDHIRIGTRTFRIITGAGHSPDQVMLYCAADKLFLSADQVLSKISPNVSVWAHEPDEDA LGSYLKSLAELTTLLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGVIAEACRDRAMSSAELVPVVFHKHVLDAHQTG FAAGELIAHVNYMLARNRLTIVDKADGILRFAAA >Mature_354_residues MHKKTDTADKPHDDLRFLLESHPGPDQVVDIAPGVLWLRLKLPFRLNHVNIYLLADGDGWAMVDTGFGNDTTIAAWETLF DGALKGFAISRVIVTHAHPDHFGQAGWIVQRFRCPFYMSQIEYLQGVYHQNRRSEERLVNSREFFHRHGMDDSITAQLLG RGQDYLKRAVPLPAAYRRLTKGDHIRIGTRTFRIITGAGHSPDQVMLYCAADKLFLSADQVLSKISPNVSVWAHEPDEDA LGSYLKSLAELTTLLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGVIAEACRDRAMSSAELVPVVFHKHVLDAHQTG FAAGELIAHVNYMLARNRLTIVDKADGILRFAAA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39642; Mature: 39642
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKKTDTADKPHDDLRFLLESHPGPDQVVDIAPGVLWLRLKLPFRLNHVNIYLLADGDGW CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCEEEEEEEEEEEECCCCE AMVDTGFGNDTTIAAWETLFDGALKGFAISRVIVTHAHPDHFGQAGWIVQRFRCPFYMSQ EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCCHHHHH IEYLQGVYHQNRRSEERLVNSREFFHRHGMDDSITAQLLGRGQDYLKRAVPLPAAYRRLT HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHC KGDHIRIGTRTFRIITGAGHSPDQVMLYCAADKLFLSADQVLSKISPNVSVWAHEPDEDA CCCEEEECCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHH LGSYLKSLAELTTLLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGVIAEACRDRAMS HHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAELVPVVFHKHVLDAHQTGFAAGELIAHVNYMLARNRLTIVDKADGILRFAAA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECC >Mature Secondary Structure MHKKTDTADKPHDDLRFLLESHPGPDQVVDIAPGVLWLRLKLPFRLNHVNIYLLADGDGW CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCEEEEEEEEEEEECCCCE AMVDTGFGNDTTIAAWETLFDGALKGFAISRVIVTHAHPDHFGQAGWIVQRFRCPFYMSQ EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCCHHHHH IEYLQGVYHQNRRSEERLVNSREFFHRHGMDDSITAQLLGRGQDYLKRAVPLPAAYRRLT HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHC KGDHIRIGTRTFRIITGAGHSPDQVMLYCAADKLFLSADQVLSKISPNVSVWAHEPDEDA CCCEEEECCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHH LGSYLKSLAELTTLLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGVIAEACRDRAMS HHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SAELVPVVFHKHVLDAHQTGFAAGELIAHVNYMLARNRLTIVDKADGILRFAAA CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA