| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86751569
Identifier: 86751569
GI number: 86751569
Start: 5061218
End: 5062258
Strand: Direct
Name: 86751569
Synonym: RPB_4471
Alternate gene names: NA
Gene position: 5061218-5062258 (Clockwise)
Preceding gene: 86751568
Following gene: 86751570
Centisome position: 94.93
GC content: 65.03
Gene sequence:
>1041_bases ATGAATCTCGCCGACCTGAACACGATCGCCCGCGCCATGGTCGCGCCCGGCAAGGGCATTCTCGCCGCCGACGAATCCTC GGGAACCATCAAGAAGCGGTTCGACGTGATCGGCGTCGAATCGACCGAGACCAGCCGCCGCGACTATCGCGAGATGATGT TCCGCTCCAAAGAGGCGATGAACGACTACATCTCCGGCGTGATCCTGTACGACGAGACGATCTGGCAGAACGCCGCCGAC GGTACGCCCTTGGTGAAGCTGATCGAGCAGGCCGGCAGCATCCCCGGCATCAAGGTCGACGAAGGCACCCAGCCACTGCC GAACTGCCCGGGCGAAACCATCACCGTCGGTCTCGACAAGCTCGCCGAGCGGCTGGCGAAATATTACAAGCAGGGCGCGC GCTTCGCGAAATGGCGCGCGGTGATCGATATCGGCGCCGGCATTCCGAGCTACGCCGCGATCCACACCAACGCGCATGCG CTGGCGCGCTATGCGGCGCTGTGCCAGCAGGCGCAGATCGTGCCGATCGTCGAGCCCGAGGTGCTGATGGACGGCGACCA CGACATCGACCGCTGCTACGAGGTCACCGAATTCGTGCTCAAGGAGACCTTCCAGGAGCTGTACTACCAGAAGGTCGCGC TCGAAGGCATGGTGCTGAAGCCGAACATGGCGGTCGCCGGCAAGAAGTCGGCCAAGTCGGCCGGCGTGCAGGAAGTCGCG GAGAAGACCGTGAAGCTGTTGAAGGCCTGCGTGCCGTCGGCGGTGCCGGGCATCGCGTTCCTGTCGGGCGGCCAGTCCGA CGAGGACGCCACCGCGCATCTCGACGCCATGAACAAAATCGGCGGCCTGACTTCGGGCCTTCCTTGGGGCCTCACCTTCT CCTACGGCCGTGCCCTGCAGGCCGCGCCGCAGAAGGCGTGGTCCGGCAAGGCCGACAACGTCGCGGCCGGCCAGGCCGCA TTCACCCACCGGGCGAAAATGAACTCGCTCGCCAGCAAGGGCGAGTGGTCATCCGACCTCGAAAGCAAGAAGGCCGCATA A
Upstream 100 bases:
>100_bases GCCCTCGCCATTTTCCTGGGCATTGTCTAAGACGGTCTGGACGTTCGAGACCCTTGCGGACCGCAAAACCAACCAAGAAA ACAGCCCAACGGAGAAGCCG
Downstream 100 bases:
>100_bases CGCCGATGGCCAAGCCTGCCCCGCCGCGCCCGGCGCCGCGCCTCTATCTCGCGACGCCGGTCGTGGACGATCCCGCACAG TTGCTGGCAGCGTTGCCGCA
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNLADLNTIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETSRRDYREMMFRSKEAMNDYISGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIGAGIPSYAAIHTNAHA LARYAALCQQAQIVPIVEPEVLMDGDHDIDRCYEVTEFVLKETFQELYYQKVALEGMVLKPNMAVAGKKSAKSAGVQEVA EKTVKLLKACVPSAVPGIAFLSGGQSDEDATAHLDAMNKIGGLTSGLPWGLTFSYGRALQAAPQKAWSGKADNVAAGQAA FTHRAKMNSLASKGEWSSDLESKKAA
Sequences:
>Translated_346_residues MNLADLNTIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETSRRDYREMMFRSKEAMNDYISGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIGAGIPSYAAIHTNAHA LARYAALCQQAQIVPIVEPEVLMDGDHDIDRCYEVTEFVLKETFQELYYQKVALEGMVLKPNMAVAGKKSAKSAGVQEVA EKTVKLLKACVPSAVPGIAFLSGGQSDEDATAHLDAMNKIGGLTSGLPWGLTFSYGRALQAAPQKAWSGKADNVAAGQAA FTHRAKMNSLASKGEWSSDLESKKAA >Mature_346_residues MNLADLNTIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETSRRDYREMMFRSKEAMNDYISGVILYDETIWQNAAD GTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDKLAERLAKYYKQGARFAKWRAVIDIGAGIPSYAAIHTNAHA LARYAALCQQAQIVPIVEPEVLMDGDHDIDRCYEVTEFVLKETFQELYYQKVALEGMVLKPNMAVAGKKSAKSAGVQEVA EKTVKLLKACVPSAVPGIAFLSGGQSDEDATAHLDAMNKIGGLTSGLPWGLTFSYGRALQAAPQKAWSGKADNVAAGQAA FTHRAKMNSLASKGEWSSDLESKKAA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=342, Percent_Identity=51.1695906432749, Blast_Score=340, Evalue=9e-94, Organism=Homo sapiens, GI34577110, Length=342, Percent_Identity=51.1695906432749, Blast_Score=340, Evalue=9e-94, Organism=Homo sapiens, GI4557305, Length=342, Percent_Identity=51.1695906432749, Blast_Score=340, Evalue=9e-94, Organism=Homo sapiens, GI193794814, Length=342, Percent_Identity=51.1695906432749, Blast_Score=340, Evalue=9e-94, Organism=Homo sapiens, GI4885063, Length=342, Percent_Identity=49.7076023391813, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI40354205, Length=332, Percent_Identity=50, Blast_Score=314, Evalue=9e-86, Organism=Caenorhabditis elegans, GI25150450, Length=334, Percent_Identity=49.7005988023952, Blast_Score=334, Evalue=3e-92, Organism=Caenorhabditis elegans, GI71983985, Length=332, Percent_Identity=51.2048192771084, Blast_Score=328, Evalue=3e-90, Organism=Caenorhabditis elegans, GI71983990, Length=230, Percent_Identity=50.4347826086956, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI45553577, Length=330, Percent_Identity=53.3333333333333, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI24650282, Length=332, Percent_Identity=52.710843373494, Blast_Score=341, Evalue=4e-94, Organism=Drosophila melanogaster, GI24650280, Length=332, Percent_Identity=52.710843373494, Blast_Score=341, Evalue=4e-94, Organism=Drosophila melanogaster, GI24650278, Length=332, Percent_Identity=52.710843373494, Blast_Score=341, Evalue=4e-94, Organism=Drosophila melanogaster, GI221459619, Length=334, Percent_Identity=52.3952095808383, Blast_Score=340, Evalue=7e-94, Organism=Drosophila melanogaster, GI24650288, Length=334, Percent_Identity=52.3952095808383, Blast_Score=340, Evalue=7e-94, Organism=Drosophila melanogaster, GI24650304, Length=332, Percent_Identity=44.578313253012, Blast_Score=298, Evalue=3e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37201; Mature: 37201
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLADLNTIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETSRRDYREMMFRSKEAM CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHH NDYISGVILYDETIWQNAADGTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDK HHHHCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECHHH LAERLAKYYKQGARFAKWRAVIDIGAGIPSYAAIHTNAHALARYAALCQQAQIVPIVEPE HHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHCCCCCEECCCH VLMDGDHDIDRCYEVTEFVLKETFQELYYQKVALEGMVLKPNMAVAGKKSAKSAGVQEVA HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHCCHHHHH EKTVKLLKACVPSAVPGIAFLSGGQSDEDATAHLDAMNKIGGLTSGLPWGLTFSYGRALQ HHHHHHHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AAPQKAWSGKADNVAAGQAAFTHRAKMNSLASKGEWSSDLESKKAA HCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MNLADLNTIARAMVAPGKGILAADESSGTIKKRFDVIGVESTETSRRDYREMMFRSKEAM CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHH NDYISGVILYDETIWQNAADGTPLVKLIEQAGSIPGIKVDEGTQPLPNCPGETITVGLDK HHHHCEEEEECHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEECHHH LAERLAKYYKQGARFAKWRAVIDIGAGIPSYAAIHTNAHALARYAALCQQAQIVPIVEPE HHHHHHHHHHHCCHHHHHHHHEEECCCCCCCCEECCCHHHHHHHHHHHHCCCCCEECCCH VLMDGDHDIDRCYEVTEFVLKETFQELYYQKVALEGMVLKPNMAVAGKKSAKSAGVQEVA HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHCCHHHHH EKTVKLLKACVPSAVPGIAFLSGGQSDEDATAHLDAMNKIGGLTSGLPWGLTFSYGRALQ HHHHHHHHHHHHHCCCCHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH AAPQKAWSGKADNVAAGQAAFTHRAKMNSLASKGEWSSDLESKKAA HCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]